Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_0956 |
Symbol | |
ID | 8446548 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | + |
Start bp | 1048192 |
End bp | 1049226 |
Gene Length | 1035 bp |
Protein Length | 344 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 645040092 |
Product | transcriptional regulator, LuxR family |
Protein accession | YP_003200355 |
Protein GI | 258651199 |
COG category | [K] Transcription |
COG ID | [COG2771] DNA-binding HTH domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 0.886587 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCACACAC CGTGGCGGCC GTTGCCCGAC CTGCTCGCCG AAGCCACCGT CGCCGATCTG CACGTGTCGG CGTTGGCGGA CCTGGTGTAC GCATCGGTGG CTCGCTACGT CCGGTACGAC TTCGGATGTC TGGCCGTCAC CGATCCGGCC AGCTGGGTGG TCACCTGGGC GTCGAAGACC CGGTCGTTGG GGGTGGGCGA CGAGGAGTTC GCCGCCGTGG AATACGGGCC ACCGGACCTG AACTCCTTTG CCGAGATCGC CCGCCGGACC CCGCCGGTCG GGGCGTTGTG GCTGGACACC GGCGGCCATC CGGAGCGGTG TCGGCGGCAC CGCGAATTCA TGCGGCCCCG GTTCGGGTTC ACCGACGAAC TACGGGTGGT GTTCCCCAGC CGGGGGGTGA TCTGGGGCGG GATGGCCCTC TACCGCGCTC ATGACGAGCC ACCGTTCAAC GAGGGCGACG TCGATCAGCT GGCCGGGGTC GCCGGTCTGC TGGGTGCAGC GCTGGCCCGG AGCCTGTTCC GGCCCATGCC GCACCCGGAG GCCGCCGGCA CGCCGCTGCA GGCCGTGCTG ATCGTCGACC GCGCCGACCA GGTCACCCAT CTCACGTCCT CGGCCGACGC CGCCGTGGCC GAGCTCGGCG GGTGGGACCA CGGCTCGCTG CCGGCCAGCG TGCTCACTCT GGTGGCCACG ACCCGGACTC GCGGAGAGCC GGCGCAGACG GTGGCCCATA CGCCCTCGGG CCGGTGGCTG CGCCTGCGGG CCGCACCGCT GTCCGGACCG GACGGCGGCG ACACGGTCGT CACCATCGAT CCCACACCCC GGGCCGCCCT GAGCCGGCTC GCCCTGGCCG CCCACGGACT GACGGCCCGG GAGGAGGACG TCGCGCTGCT GGTCCTGCAG GGGGCCAGCA CCCAATCGAT CGCGTCCGCC CTGCACCTGT CGCCGCACAC CGTGCAGGAT CATCTGAAGA AGATCTTCGG CAAGGTCGGG GTCAGCAGCC GCCGTGACCT GACCGCCCGC CTGACCCTGG GCTGA
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Protein sequence | MHTPWRPLPD LLAEATVADL HVSALADLVY ASVARYVRYD FGCLAVTDPA SWVVTWASKT RSLGVGDEEF AAVEYGPPDL NSFAEIARRT PPVGALWLDT GGHPERCRRH REFMRPRFGF TDELRVVFPS RGVIWGGMAL YRAHDEPPFN EGDVDQLAGV AGLLGAALAR SLFRPMPHPE AAGTPLQAVL IVDRADQVTH LTSSADAAVA ELGGWDHGSL PASVLTLVAT TRTRGEPAQT VAHTPSGRWL RLRAAPLSGP DGGDTVVTID PTPRAALSRL ALAAHGLTAR EEDVALLVLQ GASTQSIASA LHLSPHTVQD HLKKIFGKVG VSSRRDLTAR LTLG
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