Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_0886 |
Symbol | |
ID | 8446478 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | + |
Start bp | 976036 |
End bp | 978291 |
Gene Length | 2256 bp |
Protein Length | 751 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 645040023 |
Product | glycoside hydrolase family 3 domain protein |
Protein accession | YP_003200286 |
Protein GI | 258651130 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1472] Beta-glucosidase-related glycosidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCTGG ACGTCGATGC CCTGCTGGCC GAGTTGACGC TGGAAGAGAA GGCCTCGCTC ACCTCCGGTT CCGCCTTCTG GTTCACCGCC GCCGTGGACC GGCTGGGGAT TCCCCGGATC ATGGTCTCCG ACGGCCCGCA CGGGCTGCGC GCCCAGCCGG GCGAGGGGGA CCACGTCGGC CTCGGCGGGA GCCTGCCGGC GACCTGCTTC CCGACCGCGT CGGCGGTGGC CTCGAGCTGG AATCCCGACC TGCTGCGGCG GATCGGGGTG GCCCTGGCCC GGGAGGCGCG GGCCTGCCGG CTCTCGGTGA TCCTCGGTCC GGGCATCAAC ATCAAGCGAT CGCCGTTGTG TGGCCGCAAC TTCGAGTACT TCTCCGAGGA TCCCTACCTG ACCGGCGAAC TCGGCCTGGG CATCGTGGAC GGCATCCAGT CGCAGGGGGT CGGCACCTCG GTCAAGCACT TCGCCGCGAA CAACCAGGAG ACCGATCGGC AGCGGGTCGA CACCCAGGTC GACGAGCGCA CCCTGCGGGA GATCTACCTG CCGGCCTTCG AGCGCATCGT CACCGCCGGT CAACCGTGGA CGATCATGTG CTCCTACAAC AAGATCAACG GCGTCTCGGC CTCGCAGAAC GCCTGGCTGC TGACCACCGT GCTGCGGGAC GAATGGGGCT TCGACGGGCT GGTCGTCTCC GACTGGGGCG CCGTCTACGA CCGCGTCCCC GCTCTGGTCG CCGGCCTGGA CCTGGAGATG CCGCCGAACC GGCCCCACAG CCCGGACCAG ATCGTCGCCG CGATCCGGGC CGGGAACCTG GACGAGACCG TCCTGGATGC GCGGGTGCGC ACCGTGCTGA CCCTGGTCGA CCGCGGGGTG GCCGTGCTCG ATCTGGACGA GTCCTTCGAC GCCGACCAGC ATCACCGGCT GGCCCGGGCC GCGGCCGCCG AATCGGTAGT GCTGCTGGCC AACTCCGGTG GGCTGCTGCC GCTGGCCGCC GACGCCCGGA TCGCGGTGAT CGGCGAGTTC GCCCGGACCC CGCGGTTCCA GGGCGCCGGC AGCTCGCAGG TCAACCCGAC CCGGGTGGAG AACGCGCTCG ACGAGCTGAC GGCCCTGCTC CCGGAGGTCG GCTTCGCGGC CGGCTACGGG ATCGACGACA CCGCGTCGGA CGAGGCGTTG CGCGCGGAGG CGGTGCGACT GGCCGCCGAG GCCGACACCG TGGTCATGTT CCTGGGTCTG CCGGGCGCGG ACGAGTCCGA GGGCTTCGAC CGCACCCACA TGAACCTGCC CGCCGGCCAG CTGGCCACGC TGCGGGCGGT GGCGCAGGTC AATTCCCGGG TGGTCGTCGT GCTGGTCAAC GGCTCCACCG TGGTCCTGGG CGAGGTGGTG CCGCACGCCG CGGCGATCGT CGAGGCCTGG CTGGGCGGTC AGGCCGCCGG GGGCGCGATC GCCGACGTGC TGACCGGGCG GGTGAACCCG TCGGGCCGGT TGGCCGAGAC CATCCCGCAC CGGCTGGCCG ACAACTCCTC CTACCTCAAC TTTCCCGGCG ACTCGCAGGT CGTCCGGTAC GGCGAGGGAC TGTTCGTCGG CTACCGCGGG TACGACGCGA CCGACACCGA TGTCGCCTTC CCGTTCGGAT TCGGCCTGTC CTACACCACC TTTGCGGTCG ACGAGCTGGT CGTGAGCACC TCGGGGGCGG TCGCCGACGG CACCCTGACC GCGCAGGTCT CGGTGCGGGT GCGCAACACC GGCCCGGTGG CCGGCGCGCA GGTGGTGCAG GTCTATGTCC GGGACGTCGC CGCGTCGGTG GCCCGCCCGG TGCGCGAGCT GAAGGGGTTC GGCAAGGTCG AGCTGGCGCC GGGCCAGGCC CGCACGGTCA CCGTCACCCT CGACCAGCGG GCCTTCTCCT TCTTCTCGCA GCTGCTCGGC CGGTGGGTGG TGGAGGCCGG CGAGTTCGCC GTCGAGGTCG GCTTTCATTC GCGAGACCTG CCGCTGTCCA GCACGATCCG CGTCGACGCG CCGTCCATCG CGGCGCCGAT CACCGCCGGG TCGACGCTGC ACGAATGGAT GGCCGACCCG GTCGCATTGG AGCTGATCGG CGAGGCGGTG GCCGCGGGCG CGTCCGACCC GACCCGGGAC ACCGAGCTGG TCGCGGTGAT CGGCTCCATG CCGATGTCCA CCCTGGCCGC CTTCAGCGGC ATGAGCATCG ACCACGACAC CCTGGACCGG CTGGTCGAGC GCTGGCGGGA ACGCACCGGC GGGTGA
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Protein sequence | MTLDVDALLA ELTLEEKASL TSGSAFWFTA AVDRLGIPRI MVSDGPHGLR AQPGEGDHVG LGGSLPATCF PTASAVASSW NPDLLRRIGV ALAREARACR LSVILGPGIN IKRSPLCGRN FEYFSEDPYL TGELGLGIVD GIQSQGVGTS VKHFAANNQE TDRQRVDTQV DERTLREIYL PAFERIVTAG QPWTIMCSYN KINGVSASQN AWLLTTVLRD EWGFDGLVVS DWGAVYDRVP ALVAGLDLEM PPNRPHSPDQ IVAAIRAGNL DETVLDARVR TVLTLVDRGV AVLDLDESFD ADQHHRLARA AAAESVVLLA NSGGLLPLAA DARIAVIGEF ARTPRFQGAG SSQVNPTRVE NALDELTALL PEVGFAAGYG IDDTASDEAL RAEAVRLAAE ADTVVMFLGL PGADESEGFD RTHMNLPAGQ LATLRAVAQV NSRVVVVLVN GSTVVLGEVV PHAAAIVEAW LGGQAAGGAI ADVLTGRVNP SGRLAETIPH RLADNSSYLN FPGDSQVVRY GEGLFVGYRG YDATDTDVAF PFGFGLSYTT FAVDELVVST SGAVADGTLT AQVSVRVRNT GPVAGAQVVQ VYVRDVAASV ARPVRELKGF GKVELAPGQA RTVTVTLDQR AFSFFSQLLG RWVVEAGEFA VEVGFHSRDL PLSSTIRVDA PSIAAPITAG STLHEWMADP VALELIGEAV AAGASDPTRD TELVAVIGSM PMSTLAAFSG MSIDHDTLDR LVERWRERTG G
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