Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_0826 |
Symbol | ligC |
ID | 8446418 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | - |
Start bp | 915012 |
End bp | 916076 |
Gene Length | 1065 bp |
Protein Length | 354 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 645039963 |
Product | ATP-dependent DNA ligase |
Protein accession | YP_003200226 |
Protein GI | 258651070 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1793] ATP-dependent DNA ligase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 50 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGCTGC CCGTCATGCC CCCGGTCGCC CCGATGCTGG CCAAGTCGGT GCCCGACATC CCGACCGGTG AGCTGTCCTA CGAACCGAAG TGGGACGGGT TCCGCTCGAT CGTCTTCCGC GACGGCGACG AGGTGGAGAT CGGCTCGCGC AACGAGAAAC CGATGACCCG GTACTTCCCC GAGCTGGTCG AGGCGATCAA GGCCAACCTG CCGCCGCGCT GCGTCATCGA CGGCGAGATC GTGGTGATCG TGGGTGATCG GCTCGAGTTC GAGGTGTTGC AGCAGCGGAT CCATCCGGCG GCCAGCCGGG TCCGGATGCT GGCCGAACAG ACCCCGGCCA GCTTCGTCGG GTTCGACCTG CTCGCCCTGG GCGACACCGA CTACACCGGC CGCCCGTTCG CCGAGCGACG GGCGGCGCTG GAGCAGGCGA TGGCCGGCGC GGCGGCGCCG GTGCACCTGA CCCCGGCGAC CCGGGACCCG GCGCTGGCCG CGGAATGGTT CGAGCAGTTC GAGGGGGCCG GGTTGGACGG GGTGGTGGCC AAGCCGCTGA CCGGGACCTA CCAGCCGGAC AAGCGGACCA TGTTCAAGAT CAAGCATCAG CGGACCGCGG ACTGCGTCGT CGCCGGGTAC CGGGTGCACA AGAGCGGCCC GGATAGTATC GGCTCGCTGC TGCTGGGGCT GTACAACGAT GCCGGCGATC TGGCCTCGGT CGGCGTCATC GGCGCGTTCC CGGCCGCCCG CCGCAAGCAG TTGTTCACCG AGCTGCAGCC GCTGGTCACC ACCTTCGACG AGCACCCGTG GAACTGGGCC AAGCCGGACG AGAGCGGGGC CCGGACCCCG CGCAGTTCGG AGTACAGCCG GTGGAACGTG GGCAAGGATC TCTCGTTCAT CCCGCTGCGC CCGGAGCGGG TGGTCGAGGT CCGGTACGAG CACATGGAAG GCACCCGGTT CCGGCACACC GCCCAGTTCA ACCGGTGGCG CCCGGACCGG GACCCGCGGT CGTGCACCTA CGAGCAGCTC GAAGAACCGG TCAGCTACGA CCTGGCCGAC ATCCTGGGTC GCTGA
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Protein sequence | MQLPVMPPVA PMLAKSVPDI PTGELSYEPK WDGFRSIVFR DGDEVEIGSR NEKPMTRYFP ELVEAIKANL PPRCVIDGEI VVIVGDRLEF EVLQQRIHPA ASRVRMLAEQ TPASFVGFDL LALGDTDYTG RPFAERRAAL EQAMAGAAAP VHLTPATRDP ALAAEWFEQF EGAGLDGVVA KPLTGTYQPD KRTMFKIKHQ RTADCVVAGY RVHKSGPDSI GSLLLGLYND AGDLASVGVI GAFPAARRKQ LFTELQPLVT TFDEHPWNWA KPDESGARTP RSSEYSRWNV GKDLSFIPLR PERVVEVRYE HMEGTRFRHT AQFNRWRPDR DPRSCTYEQL EEPVSYDLAD ILGR
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