Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_0578 |
Symbol | |
ID | 8446162 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | - |
Start bp | 638542 |
End bp | 639258 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 645039711 |
Product | ABC transporter related |
Protein accession | YP_003199982 |
Protein GI | 258650826 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 46 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCCGACG CGATCACCGT CACCGAGCTG GTCGTCCGGC GCGGAAAGGC GACCGTCCTG GACGGCCTGA CCTGCCGCAT TGCCGCCGGC CGGATCACCG GACTGCTGGG CCCGTCGGGC GCGGGCAAGA CGACGCTGAT CCGGGCGGTC GTCGGGGTGC AGGTCGTCCG CGCGGGCACG GTCACCGTGC TCGGCCGGCC GGCCGGCACC CCGGCGCTGC GCGACAAGAT CGGTTACGTC AGCCAGTCGC CGTCGATCTA CCTGGACCTG ACCGTGGCCG AGAACACCAA CTATTTCGCC GCCGTCGCCG GCGTCGACCG GTCCGCCGCC CGGGCGGCCA TCGAGCAGGT CGGCCTGGCC GAGGCCGCCG GGCAACTGGC CGGCAACCTG TCCGGCGGGC AACAGTCGCG CGCGTCCCTG GCCTGCGCCA TCGTCGGTGA CCCGCCCGTG CTGGTGCTGG ACGAACCCAC CGTCGGGCTG GACCCGGTGC TGCGCGAGGA GCTGTGGGAC TTCTTCGCGC AGCGGGCCCG CGACGGGGTG AGCGTGCTGG TGTCCTCGCA CGTGATGGAC GAGGCGAACC GGTGCGACAC GCTGCTGCTG ATGCGCGCGG GCGAGCTGCT CGCCGACGAG ACCCCGGCGG CGATCAAGCA GCGGGCCGGC ACCGACGACA TGGACCGGGC CTTCCTGAAC CTGATCCGGG CGGGAGCGGC GCGATGA
|
Protein sequence | MADAITVTEL VVRRGKATVL DGLTCRIAAG RITGLLGPSG AGKTTLIRAV VGVQVVRAGT VTVLGRPAGT PALRDKIGYV SQSPSIYLDL TVAENTNYFA AVAGVDRSAA RAAIEQVGLA EAAGQLAGNL SGGQQSRASL ACAIVGDPPV LVLDEPTVGL DPVLREELWD FFAQRARDGV SVLVSSHVMD EANRCDTLLL MRAGELLADE TPAAIKQRAG TDDMDRAFLN LIRAGAAR
|
| |