Gene Namu_0578 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_0578 
Symbol 
ID8446162 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp638542 
End bp639258 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content73% 
IMG OID645039711 
ProductABC transporter related 
Protein accessionYP_003199982 
Protein GI258650826 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGACG CGATCACCGT CACCGAGCTG GTCGTCCGGC GCGGAAAGGC GACCGTCCTG 
GACGGCCTGA CCTGCCGCAT TGCCGCCGGC CGGATCACCG GACTGCTGGG CCCGTCGGGC
GCGGGCAAGA CGACGCTGAT CCGGGCGGTC GTCGGGGTGC AGGTCGTCCG CGCGGGCACG
GTCACCGTGC TCGGCCGGCC GGCCGGCACC CCGGCGCTGC GCGACAAGAT CGGTTACGTC
AGCCAGTCGC CGTCGATCTA CCTGGACCTG ACCGTGGCCG AGAACACCAA CTATTTCGCC
GCCGTCGCCG GCGTCGACCG GTCCGCCGCC CGGGCGGCCA TCGAGCAGGT CGGCCTGGCC
GAGGCCGCCG GGCAACTGGC CGGCAACCTG TCCGGCGGGC AACAGTCGCG CGCGTCCCTG
GCCTGCGCCA TCGTCGGTGA CCCGCCCGTG CTGGTGCTGG ACGAACCCAC CGTCGGGCTG
GACCCGGTGC TGCGCGAGGA GCTGTGGGAC TTCTTCGCGC AGCGGGCCCG CGACGGGGTG
AGCGTGCTGG TGTCCTCGCA CGTGATGGAC GAGGCGAACC GGTGCGACAC GCTGCTGCTG
ATGCGCGCGG GCGAGCTGCT CGCCGACGAG ACCCCGGCGG CGATCAAGCA GCGGGCCGGC
ACCGACGACA TGGACCGGGC CTTCCTGAAC CTGATCCGGG CGGGAGCGGC GCGATGA
 
Protein sequence
MADAITVTEL VVRRGKATVL DGLTCRIAAG RITGLLGPSG AGKTTLIRAV VGVQVVRAGT 
VTVLGRPAGT PALRDKIGYV SQSPSIYLDL TVAENTNYFA AVAGVDRSAA RAAIEQVGLA
EAAGQLAGNL SGGQQSRASL ACAIVGDPPV LVLDEPTVGL DPVLREELWD FFAQRARDGV
SVLVSSHVMD EANRCDTLLL MRAGELLADE TPAAIKQRAG TDDMDRAFLN LIRAGAAR