Gene Namu_0162 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_0162 
Symbol 
ID8445742 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp179647 
End bp180804 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content76% 
IMG OID645039309 
Producturoporphyrin-III C-methyltransferase 
Protein accessionYP_003199584 
Protein GI258650428 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0007] Uroporphyrinogen-III methylase 
TIGRFAM ID[TIGR01469] uroporphyrin-III C-methyltransferase
[TIGR01470] siroheme synthase, N-terminal domain 


Plasmid Coverage information

Num covering plasmid clones63 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGCGGCG TGACCGGGGC GAGCGGGTTC GGGGCGCTGC TGCCGGTGGC CGGCCGCGCG 
GTGCTGATCA CCGGCGGCGA GGAGGGTGCG CTCGGCCGGA TCGCGGCCCT GCGCGAGGCC
GGGGCCGACC TGCACGTCGT CGCGCCCACG GTGGCCGCGT CCGTGCTGGA CCTGGCCGAA
CGGGGACTGC TGCGCTGGGA CGCCCGGCCG GTCGAGCCGG CCGACGTGGC CGCCGCCTGG
CTGGTCGTGC TGGCCGGCGC CCCCGAGGTC GATGCCGCGG TGCGCGGGTG GGCCGAGCAG
CACCGGACCT TCTGCCTGGA CGATCCGGCC GACCCCGCCG AACCCACCGC TCCGGCGAGG
GGGTCCGCCG GAGTCGGGCA GGTGATCCTG GTCGGCGGTG GGCCCGGCGA TCCGGGCCTG
ATCACCGTGG CGGGTCTGGC GGCGGTGCGA GCCGCGGACG TCGTCGTCAC CGACCGGCTC
GCTCCGTTGG CCGTGCTGGA CCAGGTCCGG CCGGGCACCG AGATCGTCGA CGTCGGCAAG
ATCCCCCGGG GCCGGTTCAC CCCGCAGGAA CAGATCAACG CGATCCTGGT CGAGCACGCG
CGGGCCGGCC GAACGGTGGT GCGGCTCAAG GGCGGCGACA ACTTCGTGTT CGGTCGTGGC
GGCGAGGAAT GGCAGGCCTG CGCGGAGGCC GGCATTCCGG TGCGGGTGAT CCCGGGGGTG
AGTTCGGCGG TCGCCGTGCC CGCCCTGGCC GGGATCCCGC TGACCCACCG CACGGCCAAC
CAGGGGTTCA CCGTGATCAC CGCGCACGTG CCGCCGGGCG ATCCTCGCTC GACCCTGGAC
TACGCCGCCC TGGCCCGGTC CGGTACCGCG CTGGTGATCA TGATGGGGGT GGCCACACTG
GGGGCGGTGG CCGCCGAACT GATCGGACAC GGCCTGGACC CGGCCACGCC CGCGGCCACC
GTCGCCGACG GCGGATTGCC CGAGCAGAGG GTGGTTCGCG GCACGCTGGC CTCGATCGCC
GACGACATCG CCGTCGCCGG TCTGAAGGCG CCCGCGATCA CCGTCGTCGG GTCGGTCGCC
GCGTTCGACC CGTCGGCCGG GGGCGCCCCG GTCGAAGCCC CGGGGGGCCC CGCGCCCGGC
GGCGCCGGCC CACGTTGA
 
Protein sequence
MGGVTGASGF GALLPVAGRA VLITGGEEGA LGRIAALREA GADLHVVAPT VAASVLDLAE 
RGLLRWDARP VEPADVAAAW LVVLAGAPEV DAAVRGWAEQ HRTFCLDDPA DPAEPTAPAR
GSAGVGQVIL VGGGPGDPGL ITVAGLAAVR AADVVVTDRL APLAVLDQVR PGTEIVDVGK
IPRGRFTPQE QINAILVEHA RAGRTVVRLK GGDNFVFGRG GEEWQACAEA GIPVRVIPGV
SSAVAVPALA GIPLTHRTAN QGFTVITAHV PPGDPRSTLD YAALARSGTA LVIMMGVATL
GAVAAELIGH GLDPATPAAT VADGGLPEQR VVRGTLASIA DDIAVAGLKA PAITVVGSVA
AFDPSAGGAP VEAPGGPAPG GAGPR