| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NSE_0763 |
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| Symbol | atpD |
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| ID | 3931569 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Neorickettsia sennetsu str. Miyayama |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007798 |
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| Strand | - |
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| Start bp | 679044 |
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| End bp | 680468 |
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| Gene Length | 1425 bp |
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| Protein Length | 474 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637900919 |
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| Product | F0F1 ATP synthase subunit beta |
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| Protein accession | YP_506638 |
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| Protein GI | 88608676 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0055] F0F1-type ATP synthase, beta subunit |
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| TIGRFAM ID | [TIGR01039] ATP synthase, F1 beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAGTAA GTATAGGAAA AATAGTTCGA GTCGTTGGTC CGACAGTTGA TGTAAAGTTC
GAAGACGGCA CATTGCCAAA AATAGAGAAT GCTCTTACCT GTGACAATAA TGGAAAGATC
CTATACTTAG AAGTTGCACA GCAATTGGGA GATGGAATAG TCCGCGCTGT AGCAATGGAT
TCGACGGATG GTTTGACAAG AGATAAAGTC GTTAAAGATA CTGGGAAACC GATCTGTGTG
CCAGTCGGTA GACAGACTCT TGGGCGAATC TTTAATGTAG TTGGGGAAAT CATAGATGGT
GGTGGCCCTG TACCAGAACC TAATAAAGTT TCTTCGATAT ATGCAGAGCC TCCTAGGTTT
GATATGCAGA GTACCTCCTC TGAAATTTTG GAGACGGGGA TCAAAGTAAT CGACCTACTT
GCACCCTATT CCAAGGGAGG TAAGGTTGGT CTCTTTGGTG GTGCAGGAGT TGGAAAGACT
GTCCTTATTA TGGAACTTAT CAACAATATC GCTAAGGCCT ATGGAGGTTT CTCAGTCTTT
GCAGGTGTTG GTGAGCGAAC CAGAGAGGGG AATGATCTTT ACAGCGAAAT GGTTGAGTCT
GGGGTGATCG ACAAGGAACA TCCTGAGAAA TCTAAGGTTG TCCTGGTTTA TGGTCAGATG
AACGAGCCTC CTGGTGCACG TGCGAAGGTT GCTATGAGTG CTCTTACCAT GGCTGAATAT
TTTCGTGACA AAGAGGGGCA GGATGTGCTT TTCTTTGTGG ATAATATCTT TAGATTCACT
CAAGCGGGCG CAGAACTTTC TACTTTGTTG GGAAGAATCC CGTCGGCGGT AGGCTATCAG
CCAACCCTTG CAACGGATAT GGGAAGGCTT CAGGAGCGTA TTACCTCCAC TAAAAACGGT
TCTATTACTT CTGTTCAGGC AATATATGTT CCTGCTGATG ACATTACCGA CCCGGCTCCG
GCTACCTCTT TTGCTCACCT AGATTCTACA ACTGTTCTGT CAAGACAAGT TGCTGAAGCC
GGTATATATC CTGCAGTTGA TGCGCTTGCT TCTAGTGCAC AGATTCTTTC TCCGGAAGTG
TTAGGTCAAG AACATTACGA AGTTGCACAA AAGGTGAAGG GAATTCTTCA AAGTTATAAA
TCCCTTCAAG ATATCATTGC GATTTTGGGC ATGGAAGAGC TTTCTGAGGA AGATAAGCTT
ACGGTTTATA GGGCAAGAAA AATTGAGAAA TTTTTATCTC AGCCGTTTCA TGTAGCAGAG
GTCTTTACAG GTCAGCCAGG CAAATTCGTG AGCCTTAAAG ATACAATCGC CGGTTTCAAG
GAGTTAGTTG AGGGCAAATG TGATGATATG CCTGAAGCTG CTTTTTATAT GGTTGGTAAC
ATGAACGAGG CGAGAGAAAA GGCCATTAGT CTAAGGGAGA AATAG
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| Protein sequence | MPVSIGKIVR VVGPTVDVKF EDGTLPKIEN ALTCDNNGKI LYLEVAQQLG DGIVRAVAMD
STDGLTRDKV VKDTGKPICV PVGRQTLGRI FNVVGEIIDG GGPVPEPNKV SSIYAEPPRF
DMQSTSSEIL ETGIKVIDLL APYSKGGKVG LFGGAGVGKT VLIMELINNI AKAYGGFSVF
AGVGERTREG NDLYSEMVES GVIDKEHPEK SKVVLVYGQM NEPPGARAKV AMSALTMAEY
FRDKEGQDVL FFVDNIFRFT QAGAELSTLL GRIPSAVGYQ PTLATDMGRL QERITSTKNG
SITSVQAIYV PADDITDPAP ATSFAHLDST TVLSRQVAEA GIYPAVDALA SSAQILSPEV
LGQEHYEVAQ KVKGILQSYK SLQDIIAILG MEELSEEDKL TVYRARKIEK FLSQPFHVAE
VFTGQPGKFV SLKDTIAGFK ELVEGKCDDM PEAAFYMVGN MNEAREKAIS LREK
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