Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | NSE_0199 |
Symbol | |
ID | 3931616 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Neorickettsia sennetsu str. Miyayama |
Kingdom | Bacteria |
Replicon accession | NC_007798 |
Strand | + |
Start bp | 169119 |
End bp | 170168 |
Gene Length | 1050 bp |
Protein Length | 349 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637900355 |
Product | putative DNA replication and repair protein RecF |
Protein accession | YP_506094 |
Protein GI | 88608256 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1195] Recombinational DNA repair ATPase (RecF pathway) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00154503 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGGCCTT ATATTACGGG GGTCTTGGTT AAGGATTTCC GTAATCATGC TTTTTGGACG GGGTCATTTA AATGCAGGCA TGTCTTGCTT TGCGGTAAAA ACGGTGCCGG CAAAACAAGT ATACTCGAAG CTATATCAAA GTTATCTCCT GGGTTGGGTC TCAGGTCTGC GAGTAATATC GAGATGGTTA GATCTGGGTC TCTTTCTTGG GAGGTAAGTC TGAAATTTGC CGGTAGCACT GACTTAAGGG AAGTCGGAAT GGGCTATTAT GAGGATAAAC GAGTTACTAA ATTAAATGGG AAGTCCATTC AGTGTTTCAA GAAGGTAATT GACCTTGTCA AGGTTATGTG GCTCACCCCG CAGATGTCTA ATTTGTTTAC CACTGATAAG TCTGTTAGGA GAAAGTTTTT TGACCGTATG GTTGCACTTT CTGAACCTCA GCACCTTGAG AATCTTGTGA TGTACGAACG TTTTAAGTCA GAACGTCTGA AGATTCTTAA CGCAGGTGCG TCCAAAATGT GGTTAGATGT TAACGAAAAA AAACTAGCAG AGTTATGCAT AGCTATTACT GATGCCAGAG TGAGTTTCAT CGGACAACTG ATGAGTAATT TCCCTTCTAA AGGTTTTGGT TCTCCAGAAA TTAAATTGTT CTGTCCTGTC GCAAGTGCAA TTGGTAGGGT AGGTTCTTCT CAGCAGATGC AGTGTATTCA GTCCGCTCTT GAAAGAAGTA GAGCTATCGA TACTGTCACT GGGAAGATGC AATTTGGTGT ACACCGAACA GACTTTCTTG CTACAGTACG ACAAGGAGAC AATACCGCTA GATGCTATTC TACTGGGGAG CAAAAGTTAC TTATTTTAGG GATAATACTT GCTGCCGGTG AACTAATAGA CATAATACTT CTAGATGATA TTTTTGCTCA CCTAGATCTG CATAACTCTT CAGCCTTTCT TTTGGAGGCA ACTAAAAAAA ATTGTCAGTT TTTTTTTAGT GATCTTGACA ACAGCAAGTT CGCGCAGTTT GCAAATGTGA TACATACTAT TCCGGTTTAG
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Protein sequence | MRPYITGVLV KDFRNHAFWT GSFKCRHVLL CGKNGAGKTS ILEAISKLSP GLGLRSASNI EMVRSGSLSW EVSLKFAGST DLREVGMGYY EDKRVTKLNG KSIQCFKKVI DLVKVMWLTP QMSNLFTTDK SVRRKFFDRM VALSEPQHLE NLVMYERFKS ERLKILNAGA SKMWLDVNEK KLAELCIAIT DARVSFIGQL MSNFPSKGFG SPEIKLFCPV ASAIGRVGSS QQMQCIQSAL ERSRAIDTVT GKMQFGVHRT DFLATVRQGD NTARCYSTGE QKLLILGIIL AAGELIDIIL LDDIFAHLDL HNSSAFLLEA TKKNCQFFFS DLDNSKFAQF ANVIHTIPV
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