Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | NATL1_04411 |
Symbol | |
ID | 4780537 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. NATL1A |
Kingdom | Bacteria |
Replicon accession | NC_008819 |
Strand | - |
Start bp | 404273 |
End bp | 405265 |
Gene Length | 993 bp |
Protein Length | 330 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 640083718 |
Product | tRNA-dihydrouridine synthase |
Protein accession | YP_001014270 |
Protein GI | 124025154 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0042] tRNA-dihydrouridine synthase |
TIGRFAM ID | [TIGR00737] putative TIM-barrel protein, nifR3 family [TIGR00742] tRNA dihydrouridine synthase A |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.324632 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGAGT TTTCTCCGAT TTGTTTATCA GGCAATGGGA CGCCTAGATC TATAGAGTGT CTGGTTATTC AGTCCCCACT TGCAGGAGTG AGCGATCAAA TATTCAGGAA CTTTGTTCGT AGATGGTCTC CAAAAGCTTT ACTTTTCACC GAAATGGTAA ATGCTAAAAG TCTTGAATTA GGTCATGGTG AAGAGAAAGT AATTGAGCTT TCAGAAGAAA GTGGTCCAAT TGGTGTTCAA CTTTTTGACC ATAGGCCAGA TTCAATGGTA GATGCTGCCA TCAAAGCCGA ATCATCTGGT GCATTTCTTA TAGATATCAA TATGGGTTGC CCAGTAAAAA AAATTGCCAG GAAAGGAGGC GGAAGTGCTC TATTGAAAGA ACCAGAACTT GCGCAATTAA TCGTCAAAAA GGTTTCAAAA GCCATATCTA TTCCAGTAAC AGTCAAAATA AGATTGGGGT GGTGTGAAAC CACAAGTGAT CCAGTATCTT TTGCTTTAGG TCTACAGGAG GCTGGGGCTC AACTCATAAC TGTTCATGGG CGAACAAGAA GGCAAGGATT TTCTGGCCAT TCAAACTGGA AAGCTATTGC CCAAATCAAA AAGTCATTAG ATATACCTGT CATCGCTAAT GGTGATATTA AAAACTCTCG AGATGCTATT GAGTGCCTAA AGATCACGAA TGCCGATGGG GTGATGATAG GAAGGGCAAG TATGGGAGCT CCATGGCTGG TTGGACAAAT TGATGAAGAA ATTAAAAACC AAACAACTTT TAAACCACCT GACGCAAAGA TGAAAGTGAG CTTATCTTTA GAGCACCTAA AATTACTTGT TTCAAAGAAA GGAAGTCATG GGCTTTTGAT TGCTAGGAAA CATATGAATT GGACTTGTAG AGGTTTTGAG GGTGCGTCTA CTCTTCGCCA TAAATTAGTT AGAGCAAGCA CTCCAAACGA CGCAATTAAA CTACTGGAAG ACGAACTGAT TAAATTCAAC TAA
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Protein sequence | MKEFSPICLS GNGTPRSIEC LVIQSPLAGV SDQIFRNFVR RWSPKALLFT EMVNAKSLEL GHGEEKVIEL SEESGPIGVQ LFDHRPDSMV DAAIKAESSG AFLIDINMGC PVKKIARKGG GSALLKEPEL AQLIVKKVSK AISIPVTVKI RLGWCETTSD PVSFALGLQE AGAQLITVHG RTRRQGFSGH SNWKAIAQIK KSLDIPVIAN GDIKNSRDAI ECLKITNADG VMIGRASMGA PWLVGQIDEE IKNQTTFKPP DAKMKVSLSL EHLKLLVSKK GSHGLLIARK HMNWTCRGFE GASTLRHKLV RASTPNDAIK LLEDELIKFN
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