Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | NATL1_02811 |
Symbol | nusG |
ID | 4779141 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. NATL1A |
Kingdom | Bacteria |
Replicon accession | NC_008819 |
Strand | - |
Start bp | 259385 |
End bp | 260053 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 640083546 |
Product | transcription antitermination protein NusG |
Protein accession | YP_001014110 |
Protein GI | 124024994 |
COG category | [K] Transcription |
COG ID | [COG0250] Transcription antiterminator |
TIGRFAM ID | [TIGR00922] transcription termination/antitermination factor NusG |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.282538 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGTCAGAGA TTGAAACCAC CCCTGCTAAA GATTCAAAAA TAATTGATAG ATCAGAAGCA ATTGAGGATG ATCAATCATT TCTTGCAAAC CAATCAATCA AGACAAATAT TGCACGGTGG TACGCTATTC AAGTTGCCTC AAGTTGCGAA AAGAAGGTAA AAGCGACACT TGAGCAAAGA GCCATAACTC TTGGTGTCAG TGACAGAATA ATAGAGATAG AAATCCCTCA AACACCAGCA GTTAAGCTAA AAAAAGATGG TAGTAGGCAG ACTACAGAAG AAAAAGTTTT CCCTGGATAT GTGCTGGTTC GTATGGTTTT AGATGAAGAC ACAATGATGG CTGTAAGAAG TACACCTAAT GTAATTAATT TTGTTGGTGC AGAGGACCGC AGAGCTACTG GTAAAGCACG CGGACACATA AAACCTCGCC CTCTCAGCAG GCAAGAAGTT AATAGGATTT TCAAACGAGC AGCTGAAAAG AAAACTGTTG TCAAATTGGA TGTAGAGGAA GGTGATCAGA TTGTTGTAAC TGCAGGTCCT TTTAAAGACT TCCAAGGAGA AGTTATTGAA GTTTCAGGAG AACGAAACAA ACTTAAGGCT CTTTTATCAA TTTTTGGTAG AGAAACTCCA GTTGAACTTG AATTTTCTCA AATAACTAAG CAAAATTGA
|
Protein sequence | MSEIETTPAK DSKIIDRSEA IEDDQSFLAN QSIKTNIARW YAIQVASSCE KKVKATLEQR AITLGVSDRI IEIEIPQTPA VKLKKDGSRQ TTEEKVFPGY VLVRMVLDED TMMAVRSTPN VINFVGAEDR RATGKARGHI KPRPLSRQEV NRIFKRAAEK KTVVKLDVEE GDQIVVTAGP FKDFQGEVIE VSGERNKLKA LLSIFGRETP VELEFSQITK QN
|
| |