Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mvan_5800 |
Symbol | |
ID | 4645743 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium vanbaalenii PYR-1 |
Kingdom | Bacteria |
Replicon accession | NC_008726 |
Strand | + |
Start bp | 6186731 |
End bp | 6187978 |
Gene Length | 1248 bp |
Protein Length | 415 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639809276 |
Product | major facilitator superfamily transporter |
Protein accession | YP_956571 |
Protein GI | 120406742 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGCCG AAGCCACCGC CGCACGGCTG CCCGCGCGCA ACGCGCTGGG GCTGATGTTC GATCCGGTGT TCGGCGCGCT GTTCTGGGGC AAGATCTTCG CCGTCGTGGC GGTGTGGACC CACGGCATCG TCGCCGCGAT CGTGATGTAC GACGCGACCC GCTCGGCGCT GATGGTCGGC ATGGTCGGCG TCGTGCAGTT CGCACCGCAG CTGATCCTGA GCCCGACCAG CGGCAAGTGG GCCGACACCG GCAATCCGGC ACGGCAGATT CTGCTCGGCC GGGTCCTCTG CGTCGCCGGT TCGGGATCGA TCGCGGCGTG GATGTTCGTG CAGCCGGGGC TGACAGGTCT GGCCGCGGCC GTACCCGTCC TGCTGGGAAC GACGCTGGTC GGCTTCGGCT TCGTCGTCGG CGGACCCGCG ATGCAGTCCA TCGTGCCGAA CCTGATCCGT GCCGGTGAAC TGCCGACGGC GATGGCGCTC AACAGCATCC CGATGACGAT CGGCCGGATC ATCGGCCCCG CCGCCGGTGC ATACCTGGCC GCGCACATCG GGCCGGCCAC GGCGTTCGCG GTGAGCACGG TGCTGCACCT GGTGTTCGCG TTCTTCCTCC TCGCCGTGCG GTTTCCCGCC CCACCGGAAC GGCGGGCGGG CACCGACTAC CGCGTGCGGG TCGCCGTCCG CTATGTGCTG CGGGACCGTC CGCTGCTGCT GGCCCTCGTC GCGGTGACGA CCGTCGGGAT CGTCTCCGAC CCGTCCATCA CGTTGACCCC GTCGATGGCC GACGAGCTCG GCGGTGGCGC CTCGCTGGTG GGAACGCTGT CCGCCGTGTT CGGGGTGGGG GCGGCGGTCG GGATGACCGC GCTTGCGCTG CTGCGTGGCC GGATCGGTTC GGCCGTCGTG TCGTCCATCG GAATGGCGGC GCTCGCCGCC GGAAGCGCGA TCCTGGCCGT CGCGATGGAG CCGTGGGTGG CGTTGACCGG GTTCGCGGTG TCGGGCTTCG GCTTCGGCTG CGCGATGACC GGGCTCAGCA CCGTCGTGCA GGAGCGCGCT CCCGAGGAGC TACGCGGCCG CATCATGGCG CTGTGGCTGG TCGGGTTCCT GGGCTCCCGA CCGATCGCCG CGGCCGTCCT CGGCGGCACC GCCGACGTTC TGAGCGTGTA CGCCGCATTC GCCGTCGCCG CGGCGTTGAG CCTGGCCGTG ACGCTGCTGT GCCGCCCGGC CAAGTTGGTC GGCCCGATCC CCGACTAA
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Protein sequence | MTAEATAARL PARNALGLMF DPVFGALFWG KIFAVVAVWT HGIVAAIVMY DATRSALMVG MVGVVQFAPQ LILSPTSGKW ADTGNPARQI LLGRVLCVAG SGSIAAWMFV QPGLTGLAAA VPVLLGTTLV GFGFVVGGPA MQSIVPNLIR AGELPTAMAL NSIPMTIGRI IGPAAGAYLA AHIGPATAFA VSTVLHLVFA FFLLAVRFPA PPERRAGTDY RVRVAVRYVL RDRPLLLALV AVTTVGIVSD PSITLTPSMA DELGGGASLV GTLSAVFGVG AAVGMTALAL LRGRIGSAVV SSIGMAALAA GSAILAVAME PWVALTGFAV SGFGFGCAMT GLSTVVQERA PEELRGRIMA LWLVGFLGSR PIAAAVLGGT ADVLSVYAAF AVAAALSLAV TLLCRPAKLV GPIPD
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