| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_5303 |
|---|
| Symbol | |
|---|
| ID | 4644693 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium vanbaalenii PYR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008726 |
|---|
| Strand | - |
|---|
| Start bp | 5682585 |
|---|
| End bp | 5683148 |
|---|
| Gene Length | 564 bp |
|---|
| Protein Length | 187 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639808778 |
|---|
| Product | TetR family transcriptional regulator |
|---|
| Protein accession | YP_956080 |
|---|
| Protein GI | 120406251 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.398356 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.30324 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGCCAC CAGTTCGGAC CACACGCGAC ACATGGATCG AGGCCGGGCT GGCGCTGTTG
GCCGCCGACG GGCCGGATGC CGTGCGGGTC GAGGTGCTGG CCCAGAGGCT CGGCGTGACC
AGGGGCGGGT TCTACCGGCA GTTCGGCGGC CGACGCGAAC TCATCGACGC GATGCTCGAC
ACCTGGGAGC GGCGCAGCAT CGACGAGGTG CAGGCGCGGG TGGAATCCGA GGGTGGTGAC
GCGCGGAGCA AGGTCCGCAG AGCCGGGATG TTGACGTTCT CCGCGGAGTT GCTGCCACTC
GACCTCGCCG TGCGGGACTG GGCCCGGCGC GATGGGGAGG TGGCGGCACG GTTACGCCGG
GTGGACAACC GCCGAATGGA CTACCTGCGT GAACTCATCG CGACGATCTC CGACGATGCC
GGCGACGTCG AGGCCAGGGC GATGCTCGCA TTCTCGTTGG TGATCGGGAA CCACCTGATC
GCGGCGGAGC ATCCCGGACG GCCCCGCGAC CGTGTGGTGC GCGATGCCGC CCGACTGCTG
CTCGGCGAAA TGACACCGAT GTGA
|
|---|
| Protein sequence | MPPPVRTTRD TWIEAGLALL AADGPDAVRV EVLAQRLGVT RGGFYRQFGG RRELIDAMLD
TWERRSIDEV QARVESEGGD ARSKVRRAGM LTFSAELLPL DLAVRDWARR DGEVAARLRR
VDNRRMDYLR ELIATISDDA GDVEARAMLA FSLVIGNHLI AAEHPGRPRD RVVRDAARLL
LGEMTPM
|
|---|
| |