Gene Mvan_5238 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_5238 
Symbol 
ID4645253 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp5609451 
End bp5610311 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content68% 
IMG OID639808713 
Productdehydratase 
Protein accessionYP_956015 
Protein GI120406186 
COG category[I] Lipid transport and metabolism 
COG ID[COG2030] Acyl dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.263636 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCATCA ATCTCGACGA GGCCATCGGC GCCGAGCTGG ATCCTGTCGA ATTCGCCTGG 
ACCAGTAGCG ACATCCAGCT CTACCACCTT GGCCTGGGTG CAGGCATGGA CCCGATGGAC
AGGGCGGAGC TGCGCTATCT CGTCGACGAC ACCCCGCAGG TGCTACCGAC GTTCGGCAAC
GTCGCGCAGA GTTTCCACAT GACCGCGCCG CCGGCGGTGA AGTTCCCGGG GATCGACATC
GAGCTGAGCA AGGTTCTGCA CGCCAGCGAG GCCGTCACGG TGCCGGGCCC CATCCCGGCG
TCGGGCACCG GCATCGCGGT CACCCGGTTC ACCGAGATCT GGGACAAGGG CAAGGCCGCG
GTCATCTGGT CGGAGACGAC GGTCAAGGAT CCCGACGGCA CGCTGCTGTG GACGCAGAAG
CGGTCCATCT TCGCCCGTGG GGAGGGCGGT TTCGGCGGTG ATCGTGGCCC GTCCGGATCT
TCTGCGGCTC CCGACCGTGC GCCCGATCTC GAGATCACCG TCCCGACGTC GCCGCAGCAG
GCGCTGCTCT ACCGGATGTG CGGGGACCGA AACCCGTTGC ACTCCGATCC GGATTTCGCT
GCCGCCGCCG GCTTTCCGCG CCCGATCCTG CACGGGCTGT GCACCTACGG CATGACCTGC
AAGGCGTTGG TGGACAACCT GCTCGACGGC GACGTCTCGG GGCTGAAGTC CTACGGCGCC
CGGATGGCGG GCGTGGTTTT CCCCGGCGAG ACGCTGCGGG TGAACGTCTG GAAGGAAGAC
GGCGGCTACT CCGCCACGGT CACCACACCG GAACGCGACA ACGCGGTCGC ACTGGCAGGC
GTCGAGTTCG TCCCGGCCTG A
 
Protein sequence
MPINLDEAIG AELDPVEFAW TSSDIQLYHL GLGAGMDPMD RAELRYLVDD TPQVLPTFGN 
VAQSFHMTAP PAVKFPGIDI ELSKVLHASE AVTVPGPIPA SGTGIAVTRF TEIWDKGKAA
VIWSETTVKD PDGTLLWTQK RSIFARGEGG FGGDRGPSGS SAAPDRAPDL EITVPTSPQQ
ALLYRMCGDR NPLHSDPDFA AAAGFPRPIL HGLCTYGMTC KALVDNLLDG DVSGLKSYGA
RMAGVVFPGE TLRVNVWKED GGYSATVTTP ERDNAVALAG VEFVPA