| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_5004 |
|---|
| Symbol | |
|---|
| ID | 4645067 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium vanbaalenii PYR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008726 |
|---|
| Strand | - |
|---|
| Start bp | 5352121 |
|---|
| End bp | 5355240 |
|---|
| Gene Length | 3120 bp |
|---|
| Protein Length | 1039 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639808475 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_955782 |
|---|
| Protein GI | 120405953 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG5271] AAA ATPase containing von Willebrand factor type A (vWA) domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.998418 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGTTATG CGCAGTTCGT GGGTCGGGTC GGGGCGTTGG CCGTCGCGCT CGGGGTGGGG
GCGGCAACGG TTGCACTGCC CGGGGCGGCG TGGGCGGAGC CGAGCGACGC CGCGTCGTCG
AGCAGTGCCG ACAACACCAA AGCCGAGGAC ACAGCCGAGG ATTCGACCGC CGCCGATGAC
GCGCGGCCCG ACGACGCGGT TGACGACGAA GTCAATTCCG GCGAGGACCA CGACGAGGAG
GCTCCGCAGT CCGAGGACGG CGGCGATGGC AGCGACGAGG ACGGCGGACA ACCCGAGAAA
AAGACGCGCG GCTCGTATGG CAGCAATCGT TCAGAAGGCG AGCTAACCGG AGAGGACGCC
GACGAGGCTC GGGCCGACCG GGAGGACACC GACACCGAGG CCGACGTCGA CGTGGTCGCC
CCCGAAGCGG AGCCCACCGC TGACGAGGCC GACGACGAGG CCGACGGTGG GGATCCAGCC
GAAGTGGCCG AGCCCGGAGT CGCAGACGAC GTCGCGGTGG AACAGCCCGC CGAGGTCTCC
GACGATGCAC CCGAGCCCGT CGAATCACCG ATATCGGCGC CGTCCTCGAT CGTCACGGCG
CTGTTCGCGC CGAAGTCGTG GGGTGACACC GCGCCGGCCG ATCCGGTCGA GTCGCCACTG
CTGTGGACGC TGCTGGCGTT CGCGCGGCGC CAGTTCGGTC AACCGCGGAC CGAAATCGGT
GACAGCGGTA CGCCGACGGG CACCACCGAA CTGGTGGACC CGGGCGCCGC CGCGGTGCCT
GAGCCCGGCG AGGTCACCAA GGGGGACCCC GGGATTTTCA CCGGCACCGT CCGCGGACAG
GTGAAGGCGA CCGATCCTGA CGGCGGTTGG CTCACGTACA GCGGATCGAC CAGCACGGAG
AAGGGCACCG TCACCGTCAC CCCGTGGGGC ACGTTCCGGT ACACCCCGAG CGCCACGGCG
CGCCACGCCG CTGCTGCAGA CGGGGCGTCC ACCGAGGCCA AGACCGACAC CTTCACGGTC
ACGGTCAAAG ACGCCGCAGG CAACGCGGTC GAAGTCCCCG TCACCGTAGA CATCCTGGCG
CGCAACGCCG ATCCGTTCGG CGCGCGCGCC CGCGCCGACA ACCCGAGCCT GACCACGGGC
ACCGCGATCA TCAGGGTCAG TGCCTACGAC TTCGACCGGG ACCCGCTCGA CATCACCGGA
CCGCTCTCGA CCGGTAAGGG TGAGCTCGTC GACAACGGCG ACGGGACGTT CACCTACACG
CCGACCGCCG CGGCCCGGGA AGCCGCCAGC GACCCCGACG CACCGGACGA CGCCAGAATC
GACACGCTGA CCTTCACGAT CAGCGACGGG CACGGCGGGA TCCGCACGGC CACGGTGGAT
GTCATCGTCG CCGCCTACGC CGAGTCGAGC GCGTCGACTC CGGGGCGGGC GGCCGGCCCC
GTCCTCGTCA GCTCCAACGG CACCATCTAT CAGGTCACGT ATGACCTCGA CTCGACCAAC
AACCCGATCC GGACCCGCGT CAGCATCCTC GACGAGGACG GCCAGGTGCT CAAGACCACC
GACGTCATCC CCGGATACCC GGTGGAACAA GCGCTTCCGG TCGTCCGGCC CGACGGCAGC
CTCCTGGTGA CCACGTACAA GGCGTCCTCG AACACCTCCA CCGTCTCCAT CGTGGACGGC
CAGGGTGAGG TGAAGACCCT CGGAACGGTG ATCGGGCAGC CGTCGGCGCC GATGACGGTC
GCGCCGAACG GCGCAGTGTT CTTCAAGACC CGACAGTTCG CGTCCGGATC CGGCGACCGG
CTGGTCCGCG TCTCGGCAAC GGGTGGGCTG CGCGTGTATC AGCTCGGGGT GGCCGCTGAC
TCGCCGAGCG TGGCGCCCGA CGGCAGCGTT TACATCGTGT CCCGCTCGTT CGGCGTCACG
TCGGTGCTGG CAGTCGGGCC GGGCGGCAAC TCGCGGCGGG TGTCACTACC CCTGGGCGCC
GACACCGTCA ACGACGTCGT CATCGGCCAG GACGGCCGTG GCTATCTCAC CGTCGAGCGA
AACGTATTCG GCACCAAGAC AACTCGCGTG TACACGTTCA CCGGGACGTC GAACACCGTG
CGGGAGATCC CCGGCACTCC GGACGGCGCG AAGGTGATCA CCGCAGACGG TGTCTACCAG
TACACCTACG ACGAGTCGAC CGGGAAGTCC TACATCTCCC GGATCACCGC GGACACAATC
GAAACGTCCG ATCCCATCGA CGGGCGCGTC ATCAACCCGA TCAGCGTCAC CCCCGACGGC
ACGGTGTACG TGGCGGTACG TAACTCCGCG ACCGGGACCG ACAGCGTGGC GATCATCAGC
ACCTCCGGTG AGGTCACCAC GGTCGACATT CCCGGCACGA TCTTCCCGGT GCTGCCGAGT
GTCAGCCCCG CCGTCACCGG CGATGACGCC AACCCGAACA TCGGCGATAA CGGCTACGTC
GCCTACCAGT CCGGCGGCGT CAGCTATCTC GCGGTGGTGA ACCCCGACGG GACGATCGCG
CGCACCGTCA CACTGCCCGC CGGCGCCGTC GTCGCCACCC CGGTCGACTT CGGCCCGGAC
GGCGCGGCGT ATCAGGTCAT CGAGACACGC GACGAGCAGG GGCGGGTCAC TTCGCGGGCC
GTGCTCGCGC TGTCCACCGA CACGGTCACG CCCATGCTGC CGGGTGCCCC GTTGCAGCCG
AATTACCCGT CGATCCAGTT CGGCCCGGAC GGCAGTGGGG TGCTCATCAC CGTGGAGACC
GGCCAGTCGC CGTTCGAGTA CCACTTCCTG CGGTTCGACC AGGACGGCGC GACGATCGCC
ACCGCGGACC TCTCGGGGTT CCTCCAGTCG GCGCAGCAGG ATTACGTGTT CTGGCAGGAG
GGAGTCGTGT TCGGACCCGA CGGCACCCCG TACGCCACAC TCACCGGTGC CGATCAAGGG
GTCTGGGCAT TGACGTCGAC GGGTCCGGTC AAGGTCCTCG AGCTCGACCT CGGACAGGGC
GAGCTCGTCG AGCCCGTGAA GTTCGGACCC GATGGCACCC CGTACGTGAC GGTGTCGGAA
CGGGTCGACG GCAGCTACGT GACCACGGTG CACACCTTCA CGCCGGTCAC CATGCTGTAA
|
|---|
| Protein sequence | MGYAQFVGRV GALAVALGVG AATVALPGAA WAEPSDAASS SSADNTKAED TAEDSTAADD
ARPDDAVDDE VNSGEDHDEE APQSEDGGDG SDEDGGQPEK KTRGSYGSNR SEGELTGEDA
DEARADREDT DTEADVDVVA PEAEPTADEA DDEADGGDPA EVAEPGVADD VAVEQPAEVS
DDAPEPVESP ISAPSSIVTA LFAPKSWGDT APADPVESPL LWTLLAFARR QFGQPRTEIG
DSGTPTGTTE LVDPGAAAVP EPGEVTKGDP GIFTGTVRGQ VKATDPDGGW LTYSGSTSTE
KGTVTVTPWG TFRYTPSATA RHAAAADGAS TEAKTDTFTV TVKDAAGNAV EVPVTVDILA
RNADPFGARA RADNPSLTTG TAIIRVSAYD FDRDPLDITG PLSTGKGELV DNGDGTFTYT
PTAAAREAAS DPDAPDDARI DTLTFTISDG HGGIRTATVD VIVAAYAESS ASTPGRAAGP
VLVSSNGTIY QVTYDLDSTN NPIRTRVSIL DEDGQVLKTT DVIPGYPVEQ ALPVVRPDGS
LLVTTYKASS NTSTVSIVDG QGEVKTLGTV IGQPSAPMTV APNGAVFFKT RQFASGSGDR
LVRVSATGGL RVYQLGVAAD SPSVAPDGSV YIVSRSFGVT SVLAVGPGGN SRRVSLPLGA
DTVNDVVIGQ DGRGYLTVER NVFGTKTTRV YTFTGTSNTV REIPGTPDGA KVITADGVYQ
YTYDESTGKS YISRITADTI ETSDPIDGRV INPISVTPDG TVYVAVRNSA TGTDSVAIIS
TSGEVTTVDI PGTIFPVLPS VSPAVTGDDA NPNIGDNGYV AYQSGGVSYL AVVNPDGTIA
RTVTLPAGAV VATPVDFGPD GAAYQVIETR DEQGRVTSRA VLALSTDTVT PMLPGAPLQP
NYPSIQFGPD GSGVLITVET GQSPFEYHFL RFDQDGATIA TADLSGFLQS AQQDYVFWQE
GVVFGPDGTP YATLTGADQG VWALTSTGPV KVLELDLGQG ELVEPVKFGP DGTPYVTVSE
RVDGSYVTTV HTFTPVTML
|
|---|
| |