Gene Mvan_4778 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_4778 
Symbol 
ID4644103 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp5117628 
End bp5118281 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content68% 
IMG OID639808247 
ProductTetR family transcriptional regulator 
Protein accessionYP_955557 
Protein GI120405728 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCAGTGT CCGATAAGCG CGGCGGTCCC GATACCCACG TGCGCGCGCC GCGGGCACGG 
ATGACGGGCA CGGAGCGTCG CCAACAGCTG GTGGAGATCG CCAAGTCGCT GTTCGCCGAG
CGGGGTTTCG ACGGCACGTC GATCGAGGAG ATCGCGCTGC GCGCGAACGT GTCCAAGCCG
GTGGTCTACG AACACTTCGG CGGCAAGGAA GGTCTCTACG CGGTCGTCGT CGACCGGGAG
ATGTCGGCGC TGCTCGACGG CATCACGTCC TCGCTGGCCG ACAACCGGTC CCGGGTGCGG
GTGGAACGGG TCGCGCTGGC GCTGCTGACC TACGTCGAGG AGCACACCGA CGGCTTCCGC
ATCCTGATCC GCGACTCACC GGCCAGCATC ACGTCGGGGA CGTACTCGAC ATTGCTCAAT
GACGCCGTCA GCCAGGTCGC GTCGATCCTC GCCGGCGACT TCTCCCGCCG CGGCCTTGAC
CCCGACCTCG CGCCGCTGTA CGCCCAGGCG CTGGTCGGAT CCGTGTCGAT GGCGGCGCAG
TGGTGGCTCG ACGTGCGCGA ACCCAAGAAA GAGGTCGTCG CCGCCCACCT GGTCAACCTG
TGCTGGAACG GGCTGACCCA TCTGGAGTCC GACCCGGTGC TGCACGAGGA GTGA
 
Protein sequence
MAVSDKRGGP DTHVRAPRAR MTGTERRQQL VEIAKSLFAE RGFDGTSIEE IALRANVSKP 
VVYEHFGGKE GLYAVVVDRE MSALLDGITS SLADNRSRVR VERVALALLT YVEEHTDGFR
ILIRDSPASI TSGTYSTLLN DAVSQVASIL AGDFSRRGLD PDLAPLYAQA LVGSVSMAAQ
WWLDVREPKK EVVAAHLVNL CWNGLTHLES DPVLHEE