| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_4514 |
|---|
| Symbol | |
|---|
| ID | 4646831 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium vanbaalenii PYR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008726 |
|---|
| Strand | - |
|---|
| Start bp | 4848959 |
|---|
| End bp | 4850566 |
|---|
| Gene Length | 1608 bp |
|---|
| Protein Length | 535 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639807984 |
|---|
| Product | ABC transporter-related protein |
|---|
| Protein accession | YP_955295 |
|---|
| Protein GI | 120405466 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.00577215 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.484903 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTTCTG TTGTCTGTAG CCATCTGTCA TTCTCCTGGC CCGACGACAC CCCGCTGTTC
ACCGACCTGT CCTTCACCGT CGGCGCGGGC CGCACCGGGC TGGTCGCGGC CAACGGCGCA
GGCAAGAGCA CGCTGCTGCG GCTGATCGCC GGCGAGCTGA CCGCCACCAC CGGCGCGGTG
ACCGCCGACG GCGTGGTCGG CTATCTTCCG CAGACGCTCC CGCTGCTCGA CGACCGCAGC
GTCGCCGACG TGCTCGGCGT CGCCGCGGTG ATCGACGCGT TGAACGCCCT GGCAGCAGGG
GATCCGAGCG CCCACCACTT CGCGATGATC GGTGACGACT GGGACGTCGA GGAACGCACC
CGGGCCCAGC TGGACCGGCT CGGCCTCGGG CACATCGGGT TGGACCGGTC GCTGCGGTCG
CTGTCCGGCG GGGAGGTGGT CAGCCTCGGC CTGGCGCGGG AGTTGTTGCG CCGCCCCGAC
GTGCTGCTGC TCGACGAGCC CACCAACAAC CTCGATGCGG ACGCGCGCCA CCGGCTCTAC
GACGCGCTCG ACGACTTCGG CGGATGCCTG CTGGTGGTCA GCCACGACCG GGTGCTACTG
GACCGGATGG ACCGGATCGC GGAGCTCTAC CGCGGGCAGG TGCGCTTCTA CGGCGGCAAC
TTCACCGCCT ATCAGGACGC GGTCACCGAT GCCCAGCGCG CGGCGCAGGA CGCGGTCCGC
AGCGCCGAGC AGCTCCTGCG ACGCGAGAAG CACCAACGTC AGCAGGCCAG GGAACGGGCG
GACCGCCGCG CAGGCACCGC CGCCCGCACA CTCGGTGACG CCGGGCTGCC GAAGATCGTC
GCCGGCGCGC GGAAGCGCCG CGCGCAGGAG ACGGCGGGCC GCTCCGACGA CGTGCACGCC
AGCCGGGTCG ACGACGCCAG AAGCCGTCTG GAGGACGCCG AGCGCGCGGT GCGCGACGAC
GACGCACTGG TGCTGGAGCT GCCCGGTACG CTCGTGCCGT CAGCGCGGAT GGTTCTGCGG
CTCAACGGGA TACGTGTGAG GAGGAACGGA TGCGACGTTC TCGACGGCAT CGACCTGACG
GTGCGCGGAC CTGAGCGGAT CGCGTTGACG GGACCCAACG GCGCAGGCAA GACGACTCTG
CTGCGGACCC TGCTCGGGGA GATCGAACCG GACGCCGGCG CCGTCGAGGT CGCCGACGGG
CGCGTCGCCT ACCTGTCGCA ACGGCTCGAT CTCCTCGACG AAGACCGATC GGTCGCCGAG
AATCTCGCCG CGTTCGCACC CAGCCTGACG GTGACCCGGC GCCGTCATCT GCTGGCGCAG
TTCCTGTTCC GCGGCGATGC CGTCGAGCGT CCGGTGCGCG TGCTGTCGGG CGGGGAGCGG
CTGCGTGCCA CGCTGGCCTG CGTGCTGTAC GCCGAACCGG CGCCACAGCT GCTGCTCCTC
GACGAGCCGA CCAACAACCT CGACCTGGTC AGCGTCGGGC AGCTGGAAAG CGCGTTGGCG
GCCTATCGCG GCGCCTTCAT CGTCGTCAGC CACGATGCGT CGTTCCTCGA CGCAATAGGA
GTGGATCGTG TTCTGCGCCT TGCCGACAGC ACGCTCGCGC CGGGCTAG
|
|---|
| Protein sequence | MSSVVCSHLS FSWPDDTPLF TDLSFTVGAG RTGLVAANGA GKSTLLRLIA GELTATTGAV
TADGVVGYLP QTLPLLDDRS VADVLGVAAV IDALNALAAG DPSAHHFAMI GDDWDVEERT
RAQLDRLGLG HIGLDRSLRS LSGGEVVSLG LARELLRRPD VLLLDEPTNN LDADARHRLY
DALDDFGGCL LVVSHDRVLL DRMDRIAELY RGQVRFYGGN FTAYQDAVTD AQRAAQDAVR
SAEQLLRREK HQRQQARERA DRRAGTAART LGDAGLPKIV AGARKRRAQE TAGRSDDVHA
SRVDDARSRL EDAERAVRDD DALVLELPGT LVPSARMVLR LNGIRVRRNG CDVLDGIDLT
VRGPERIALT GPNGAGKTTL LRTLLGEIEP DAGAVEVADG RVAYLSQRLD LLDEDRSVAE
NLAAFAPSLT VTRRRHLLAQ FLFRGDAVER PVRVLSGGER LRATLACVLY AEPAPQLLLL
DEPTNNLDLV SVGQLESALA AYRGAFIVVS HDASFLDAIG VDRVLRLADS TLAPG
|
|---|
| |