Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mvan_4012 |
Symbol | |
ID | 4647468 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium vanbaalenii PYR-1 |
Kingdom | Bacteria |
Replicon accession | NC_008726 |
Strand | + |
Start bp | 4292328 |
End bp | 4293110 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639807474 |
Product | xylose isomerase domain-containing protein |
Protein accession | YP_954795 |
Protein GI | 120404966 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3622] Hydroxypyruvate isomerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.167546 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.990546 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCTTCC AGCTGGCGGT CTGCGCGGAG ATGGTGTTCA CCGATCTGCC GATCCTCGAC CGGGTCCGCC GGATCGACGA GCTCGGCTTC GCCGCCGAGA TCTGGAGCTG GCACGACAAG GACCTGGCCG CGCTGGCCAC GACGGGCGCC ACCTTCACGT CGATGACCGG CTACCTGCAC GGCGACCTGA TCGACCCCGC GACCTGCGAC GAGGTCGTGC GGACCGCGGA GCGCAGCATC AGAGCGGCCG AGACGCTCGG TGTCACACGA CTGAATCTGC ACACCGCCGA GCTGGTCGAC GGCCGGGCCG CCCGACCCCG ACAGCGCAGC ACCGGCCAGA TGTGGTTGAC GGCGGCACGC ACGTTGGAGC GCGTCGGTGA GCTCGGCGCC GCGTCCGGCG TGACGTTCTG CGTCGAGAAC CTCAACACGA TCGTCGACCA TCCAGGGGTG CCGCTGGCCC GCGCCAAGGA CACGCTGGCC CTTGTGGAAG GCGTCGGCCA CCCGAACGTC AAGATGATGC TCGACCTCTA TCACGCCCAG ATCGGCGAGG GGAACCTGAT CGAACTGATC CACCGCTGCA AAGACGCGAT CGGTGAGATC CAGGTGGCCG ATGTGCCCGG CCGCTGCGAG CCGGGCACAG GTGAGATCAA CTATCAGGCG ATCGCAAACG CTCTGCGCGA CATCGGATTC GACGGCACCA TCGGAATGGA GGCGTGGGCA TCCAACGCCG GGGTGGCGGG AAGTGAGGCC GCACTGGCGG CGTTCCGGAC CGCGTTCGCA TAA
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Protein sequence | MSFQLAVCAE MVFTDLPILD RVRRIDELGF AAEIWSWHDK DLAALATTGA TFTSMTGYLH GDLIDPATCD EVVRTAERSI RAAETLGVTR LNLHTAELVD GRAARPRQRS TGQMWLTAAR TLERVGELGA ASGVTFCVEN LNTIVDHPGV PLARAKDTLA LVEGVGHPNV KMMLDLYHAQ IGEGNLIELI HRCKDAIGEI QVADVPGRCE PGTGEINYQA IANALRDIGF DGTIGMEAWA SNAGVAGSEA ALAAFRTAFA
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