Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mvan_3496 |
Symbol | |
ID | 4649312 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium vanbaalenii PYR-1 |
Kingdom | Bacteria |
Replicon accession | NC_008726 |
Strand | - |
Start bp | 3715380 |
End bp | 3716042 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639806973 |
Product | TetR family transcriptional regulator |
Protein accession | YP_954297 |
Protein GI | 120404468 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.942341 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.33628 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTACTG CATCGCCGGT CCGGCGTCAA CGCCTGTGCT ACCGTCGTGC CACGATGGCC CGCAAACGCC GAGGTTGGGG CGGTGATCCG CCCGCCACCG ACTCCGAAGC CGCGCAGCGC ATCGTCGTTG CCGCCGTCGA TCTGATCGCC CGGACGGGGG CGGCCATCAC CATCGCCGAC GTCGCCGAGT CGCTCGAGGT GACCCGGCAG ACGGTGTACC GCTACTTTTC GACGGCCGAC GAACTCATGC GCGCCGCCGC GATCGCATCC GTCGACGGAT TCCTCGACCA GCTCGCCGCG CATGTGCGCG GCATTCACGA TCCGGCCGAC GCGATGACCG AGGGCGTGAT GTTCACCCTC GACGCCGTCG CGGCGATCCC GCACCTGGCG ATCCTGCTGT CGGCGCCCAG TGAGGCCGCC AGGCCCAGCG AGGTCACCTC GGACCTCGCG CAGGACTTCG GCATGCGCAT GATCACCCGC TTCGACGTGG ACTGGCAGCG CTACGGGTAC GACGACGCGG CGCTGCGAGA CCTCGTCGAG TTCACGCTTC GGACCATGCT GTCGTTCTTC GTCGCGCCCA ACGTGCGCCC CCCTGAAGAG CTGCGCCGCT TCCTGACGAG GTGGCTGGGC AGCGCGATTC TGGCGCAGAG CGTCAAAGCG TGA
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Protein sequence | MVTASPVRRQ RLCYRRATMA RKRRGWGGDP PATDSEAAQR IVVAAVDLIA RTGAAITIAD VAESLEVTRQ TVYRYFSTAD ELMRAAAIAS VDGFLDQLAA HVRGIHDPAD AMTEGVMFTL DAVAAIPHLA ILLSAPSEAA RPSEVTSDLA QDFGMRMITR FDVDWQRYGY DDAALRDLVE FTLRTMLSFF VAPNVRPPEE LRRFLTRWLG SAILAQSVKA
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