Gene Mvan_3402 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_3402 
Symbol 
ID4645012 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp3617092 
End bp3617823 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content71% 
IMG OID639806879 
Productbeta-lactamase domain-containing protein 
Protein accessionYP_954204 
Protein GI120404375 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.433473 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.430357 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCGCTG GACCTTCGCT GGAATGGGAA CGGATCACCG CGCAGGTGAT GCGCTGCAGA 
TTGCCCTTCT GTGATGTCAC CGTGGGCGTC GTCCACGCCG GCGGCGAGGC CCTGGTCGTC
GACACCGGCA CCACGCTGGC GGAGGCCCGC GCCGTGGTGC GCGATGTGGC GGCGCTGACC
GATTGTGTGG TCCGTCATGT CGTGGTGACG CACAACCACT TCGATCACGT TCTCGGGCAC
TCGGCGTTCG GCGGCGCGCA GACGTTCTGC TCGGCCGAGG TCGTCGCGAC CATGGCCGAT
GCCGGGGAGT CGCTGCGCGC CGATGCGATA CGGCACGGTG CCGACCCGTG CGAGGTCGAC
GACGCGCTGG CGGCGCTGAG ACCGCCGGTC GGTGCGGTGT GCGACGGGGT GGTCGAGCTC
GGTGACGTCG TCGTGACCAT CGCCCACCCG GGCCGCGGGC ACACCGCGCA CGACCTGATC
GTCGTCGTCG AGGGTGGTCC CCGCACCGTG GTGTTCTGCG GAGATCTGGT CGAGGAGTCC
GGTGACCCCT GCATCGACGC GCAGTCCGAC CTCGACGCCT GGCCTGGGAC GCTGCGGCGG
GTGTTGGCTG CGGGAGGTGA GAGCGCGGTC TACGTGCCCG GGCACGGTGC GCTGGTCGAC
GCGTCGTTTT TGCGGCGTCA AGCGGACTGG TTGGCGACCG CGGCCTCGGG GCGGGGCCAG
GTAGGGTGCT GA
 
Protein sequence
MVAGPSLEWE RITAQVMRCR LPFCDVTVGV VHAGGEALVV DTGTTLAEAR AVVRDVAALT 
DCVVRHVVVT HNHFDHVLGH SAFGGAQTFC SAEVVATMAD AGESLRADAI RHGADPCEVD
DALAALRPPV GAVCDGVVEL GDVVVTIAHP GRGHTAHDLI VVVEGGPRTV VFCGDLVEES
GDPCIDAQSD LDAWPGTLRR VLAAGGESAV YVPGHGALVD ASFLRRQADW LATAASGRGQ
VGC