| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_2922 |
|---|
| Symbol | |
|---|
| ID | 4645402 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium vanbaalenii PYR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008726 |
|---|
| Strand | + |
|---|
| Start bp | 3099684 |
|---|
| End bp | 3100544 |
|---|
| Gene Length | 861 bp |
|---|
| Protein Length | 286 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639806403 |
|---|
| Product | RpiR family transcriptional regulator |
|---|
| Protein accession | YP_953734 |
|---|
| Protein GI | 120403905 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1737] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.0454555 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACGAAC GGAGCGAGAC GGTGGAGGCG CGCACCAATG CCGCGCTGGC CGGGCTCAGT
CGCGCCGAAC GCCGGGTGGG GCGCGCCCTT TTGGCGGATT ATCCGAGCGC AGGTCTGGCC
AGTGCCGCCC GGCTCGCCGA ACGCGCCGAG GTGAGCCCAC CGACGGTCCT GCGCTTTGCG
CAGTCGCTGG GCTATGACGG ATTCACCGAC CTGCAGGTGG CGCTGCGGGC CGAACTCACC
CAGCAGTCGA GCGGTCCGTT GACGCGGTTG GCCGACGCCC CGCGCGCAGG CAGTCAGCTC
GACCGTCTTC TGCAGCAGGC CCGCGCCCAG AACGCGCGGG CCGACGAGAC ACTGGCGCGG
CTGCCCGCGC CCATGCTGGA AGCCGCGGTG GCGCTGATGG CCGACGCGTC TCGCCCGCTG
CACCTGCACG GCGGTCGGTT CTCGCACCTG CTCGCCGTGT ATCTGGCCGC CCATCTCGAG
CAGCTGCGGC CCGGCGTCCG GCTGCTGTCG GACCCGAAGG GCAAAGACCT CGGCACGATG
ATGGACCTCA CCCGACGCGA CGTCGTGGTG CTGTTCGACT ACCACCGGTA TCACCGCAGC
GCGGCAGAGC TCGCGGCGGA CGTGCACCGC GCGGGGGCGA CCCTGCTGCT GATCACCGAT
GACATGGCGT GTCCCGTGGC TCCCGACGCC GAGGTGGTGC TGGCGGCGTC GAGCACCGTG
GGAACCGTGT ACCAGAGCAT GTCGGCGGGG TTCCTTCTGG CCGAGTTGCT GATCCCGTTG
GTGATGGACG CGATCGGGGA ACCAGCGCGG ACGCGGATGG CTCTGTGGGA GGAGCGTCGG
CGCGGCGAAG TGCTGCCATG A
|
|---|
| Protein sequence | MDERSETVEA RTNAALAGLS RAERRVGRAL LADYPSAGLA SAARLAERAE VSPPTVLRFA
QSLGYDGFTD LQVALRAELT QQSSGPLTRL ADAPRAGSQL DRLLQQARAQ NARADETLAR
LPAPMLEAAV ALMADASRPL HLHGGRFSHL LAVYLAAHLE QLRPGVRLLS DPKGKDLGTM
MDLTRRDVVV LFDYHRYHRS AAELAADVHR AGATLLLITD DMACPVAPDA EVVLAASSTV
GTVYQSMSAG FLLAELLIPL VMDAIGEPAR TRMALWEERR RGEVLP
|
|---|
| |