| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_2744 |
|---|
| Symbol | |
|---|
| ID | 4646326 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium vanbaalenii PYR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008726 |
|---|
| Strand | - |
|---|
| Start bp | 2906097 |
|---|
| End bp | 2906660 |
|---|
| Gene Length | 564 bp |
|---|
| Protein Length | 187 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639806225 |
|---|
| Product | TetR family transcriptional regulator |
|---|
| Protein accession | YP_953557 |
|---|
| Protein GI | 120403728 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1309] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.184508 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.510089 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTCGGG TGACCGACGA TCATCTGGCG GCGCGTCGCC GCCAGATCCT CGACGGTGCC
CGGCGATGCT TCGCCGAGTA CGGCTACGAC CGGGCCACGG TCCGCCGTCT GGAGCAGACG
ATCGGGCTCT CGCGCGGCGC GATATTCCAC CACTTCCGCG ACAAGGACAC GCTGTTCTTC
GAACTGGCGC GTGAGGACGC GGAGCGGATG GCCGATGTCG CGGCGCGCGA GGGCTTGATC
CAGGTGATGC GCGACATGCT GGCCGCACCG GATCAGTTCA ACTGGCTGGC CACCCGGCTG
GAGATCGCAC GCAAACTGCG CAACGATCCG GCCTTCAGCC GCGGCTGGGC GGAGCGGTCG
GCGGAGCTGT CGGCGGCCAC CACGGAGCGG CTGCGCCGCC AGAAGCGGGC CGGGCGTCTA
CGTGACGATG TCCCCGGAGA TGTCCTGCGC ACCTACCTCG AGTTGGTCCT CGACGGCTTG
GTGGCACGGC TGGCCTCCGG AGACGATCCG GAAAAGCTGG GCGCCGTACT GGATCTGGTG
GAAGCCTCGG TACGCCAGCA GTGA
|
|---|
| Protein sequence | MPRVTDDHLA ARRRQILDGA RRCFAEYGYD RATVRRLEQT IGLSRGAIFH HFRDKDTLFF
ELAREDAERM ADVAAREGLI QVMRDMLAAP DQFNWLATRL EIARKLRNDP AFSRGWAERS
AELSAATTER LRRQKRAGRL RDDVPGDVLR TYLELVLDGL VARLASGDDP EKLGAVLDLV
EASVRQQ
|
|---|
| |