Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mvan_1813 |
Symbol | |
ID | 4644069 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium vanbaalenii PYR-1 |
Kingdom | Bacteria |
Replicon accession | NC_008726 |
Strand | + |
Start bp | 1925236 |
End bp | 1926315 |
Gene Length | 1080 bp |
Protein Length | 359 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639805301 |
Product | PDZ/DHR/GLGF |
Protein accession | YP_952641 |
Protein GI | 120402812 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3480] Predicted secreted protein containing a PDZ domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0366136 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAACTCAG GTGGTCTTCG CGGTTCGCCA CGGGCGTTGA CCTCTACTGT GGGCCGCGTG AACAGGCGGA TTTCCACGAT GGTCGTCGCA CTGGTGCCCA TCCTGGTCTT CGGAGTGCTG CTGACCGTGG TGACCGTGCC CTACGTCGCG CTCGGACCGG GACCGACGTT CGACACGCTG GGCGAGGTGG ACGGCAAACA GGTCGTCGAC ATCGAGGGCG CCCACGTGCA CAAGACCTCG GGACATCTCA ACATGACCAC GGTGTCGCAG CGCGACGGTC TGACGCTGGG GCAGGCCCTG GTGTTCTGGG CGTCGGGCCG CGACCAGCTG GTCCCCCGGG AACTGGTCTA TCCGCCGGAC AAGAGCAGGG AAGAGATCGA CGAGGCCAAC ACCAGAGACT TCCGCGACTC CGAGGACAGC GCCGAATACG CCGCGCTGCA GTACCTGAAG TACCCGATGG CCGTCACCGT CGAGAGCATC GACGAGAAGG GTCCGTCGAA GGGCAAGCTG CAGGCCGGTG ACGCGATCGA CGCGGTCAAC AACACGCCCG TCGCCTCCCT GGCCCAGTTC CAGGAACTGC TCAAGAGCAC CAAGCCCGGC GACACGATCA TCGTCGACTA CCGGCGCAAG AACGCCCCGA TGGGCACGAC CGAAATCACG CTCGGCAGCC ATCCGGATCG TCCCCAGGGT GTCGTCGGGG TGAACGTGCT CGACGCGCCG TGGGCGCCGT TCACCATCGA CTTCAACCTG GCCAACATCG GCGGGCCGTC GGCCGGGCTG ATGTTCAGCT TGGCCGTCGT CGACAAGCTG ACCACCGGAG ACGTCAACGG CGGCAAGTTC GTCGCGGGCA CCGGCACCAT CAGCGGCGAC GGCAAGGTCG GCTCCATCGG CGGCATCACC CACAAGATCG TCGCCGCCAG GGACGCCGGC GCCACCGCGT TCCTGGTGCC CGCCGACAAC TGCGCGGAGG CCAAGACCGC CGACGCCGAC GGCATCGAGT TGCTCAAGGT GGACACCCTC GAACACGCCG TCGACGGATT GCGCACCCTT TCCGCTGGTG GCGAACCTCC CCGCTGCTGA
|
Protein sequence | MNSGGLRGSP RALTSTVGRV NRRISTMVVA LVPILVFGVL LTVVTVPYVA LGPGPTFDTL GEVDGKQVVD IEGAHVHKTS GHLNMTTVSQ RDGLTLGQAL VFWASGRDQL VPRELVYPPD KSREEIDEAN TRDFRDSEDS AEYAALQYLK YPMAVTVESI DEKGPSKGKL QAGDAIDAVN NTPVASLAQF QELLKSTKPG DTIIVDYRRK NAPMGTTEIT LGSHPDRPQG VVGVNVLDAP WAPFTIDFNL ANIGGPSAGL MFSLAVVDKL TTGDVNGGKF VAGTGTISGD GKVGSIGGIT HKIVAARDAG ATAFLVPADN CAEAKTADAD GIELLKVDTL EHAVDGLRTL SAGGEPPRC
|
| |