| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_1616 |
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| Symbol | |
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| ID | 4646361 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium vanbaalenii PYR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008726 |
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| Strand | - |
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| Start bp | 1717085 |
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| End bp | 1717831 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639805111 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_952451 |
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| Protein GI | 120402622 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0140794 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGAACAC TGGAGGGCAA GACCGCCGTC GTCACGGGCG CCAGCTCCGG CATCGGACTG
GCTGCCGCAC AACGACTTGC CGACGAAGGC GCCCACGTCT TCATCACCGG CCGGAAGAAG
CCCGCCCTGG ACGCCGCCGC CGCGTCGCTC GGCTCCGCGG CCACCGCCGT GGTGGGCGAC
ATCGCGCGAG CCGCCGACCT GGATCAGCTC TACGACGCCG TCCGGGCTCG CGGCAGGGGC
CTCGACGTGC TTTTCGCGAA TGCAGGGTTG GCGGTGCTGG GACCCCTGGC CCAGGCCACC
GAGGCGGACT ACGAGCAGAA CTTCGACGTC AACGTGCGTG GAACGTGGCT CACCGTGCAG
AAGGCGGCGC CCCTTCTCAA CGACGGTGCG TCCGTCATCG TCAACTCGTC CATCCGCGCC
GACGACGGGT GGGAGAACTT CGGGCTGTAC TCGGCGTCGA AGGCCGCGGT CCGCTCGCTC
GCGCGGACCT GGGCCAACGA GCTCAAGGAC CGGGGAATCC GGGTCAACAC GGTCTCCCCG
GGTGCGATCG ACACCCCCGC GGTCGACAAG GTCGTCGACC CCGAGGTGGC CTCGGCGTTC
AAGGCCGAGC TGGTCAAGGG GGTTCCGATC GGCCGGCTGG GCCGCCCCGA AGAGGTCGCG
GCCGCGGTGG CCTTCCTGGC GTCGGCCGAC AGCAGCTTCA TCTACGGCGC GAATCTCGAC
ATCGACGGTG GCGAGCACCA GGTCTGA
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| Protein sequence | MGTLEGKTAV VTGASSGIGL AAAQRLADEG AHVFITGRKK PALDAAAASL GSAATAVVGD
IARAADLDQL YDAVRARGRG LDVLFANAGL AVLGPLAQAT EADYEQNFDV NVRGTWLTVQ
KAAPLLNDGA SVIVNSSIRA DDGWENFGLY SASKAAVRSL ARTWANELKD RGIRVNTVSP
GAIDTPAVDK VVDPEVASAF KAELVKGVPI GRLGRPEEVA AAVAFLASAD SSFIYGANLD
IDGGEHQV
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