| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_1604 |
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| Symbol | |
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| ID | 4646349 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium vanbaalenii PYR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008726 |
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| Strand | + |
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| Start bp | 1701568 |
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| End bp | 1703463 |
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| Gene Length | 1896 bp |
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| Protein Length | 631 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639805099 |
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| Product | putative GAF sensor protein |
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| Protein accession | YP_952439 |
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| Protein GI | 120402610 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG2508] Regulator of polyketide synthase expression |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0719591 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCCCG GCGCCGACAC CGCTGAATTA CGATGGGCCA TGCCCGACGA ACCGTTGTCG
CAGGTCGAAC TGCGGGCGGT CGCGCACCTC ACCCGGGTGC TCGGTTCCAC CGACGACGTG
ACGGCGGTCG CGCAGGGCCT TGCCGAGGCG ATCCAGGCCG GCCGGGTCAA CCGTGACGTC
TACTCCTATG TCTACGACAC CGAGGCCAAG GAACTCGTCC TGACCGGCGC GACGGAAAGC
CCCGCCGCCG AGCACGTGGG GGCGCTTCGC GTCGCCTACG GTGACGGCGT GACCGGGTGG
GTGGCGGCGA CGAAGCAGAG CTACCTGGTT CCCGACGAGC CGGCCCGCGA TCCACGGTTC
CTCGCCTATC CCGGCATCGG CGAGGAGCGT TACGGCGCGA TCTTCTCGGT GCCGATCGTC
TCGCCGCGGG GCGAGCCGCT CGGCTGCATC ACGGTGTGGG CCACCACCGG TCACCGCTTC
GATTCGGGCG AGGTGGCCTT CGTCGAACGG ATGGCGGCGC TGGTGGCCCC GGTGTTCGGC
ACGGCGAGGC AGCGTCAGAC CAGCAGCCGG CTGCTGCTGG TGGGCTCCGG TCTGACCGAG
TTGGCGTCGA TGGTGGCCTC GGCGACGCCG ACCGGCCCCA CGATGGACTA CGCGGTCGAG
TTCCTCACGG AGGCGGCGGG TCTGGACGTC GCGGTCGCGT TCGTCACCGA CCCGTCCGGG
GTCGACCGGA TGCACATGAA GGTGTCGACC GAATCCGACC GTGCCAGGCC AGAACTCGAC
GGGCAGCAGC TCCTGCTCGT CGAGCAGGGC GTGCGCAACG GGATCACCGA CTGGCGCACC
GCCTCCCAAC TCGTCAACCG CGCGCTCGAC GGCGTCGCAG GTGCGGTGAC GAGCGCCCCG
ATGCGGGTGG GGCCGGAAGA GTTCGGCGTG ATCGCCTGTT ACCGACTGAA ACCCGTGCGG
TTCACCTCCG AGGAGTCCGC GATGGTGACG GCGGTGGCCA ACCATGCCGC GGTCGCGATC
CGGCTGGCGG TGCTCTCGGA TGAGTTGGCG GCACGCAACA GGTTGAACTG GTTCCTGCGT
GATCTGTCGT CGGGGCGGCT GGGCGCCGAG GAGTTGCGGC GCCGTGCCGC GGCCGTCGGC
CTGGACACCG CCAACCGCCA CGTGTTCGTG GTGGGCAGCG TATCGACCAA GTCCATGCCG
CATCCCGAGT CCGGCCCGGT CAGCGTGGCG CTCGGCGAGC TGCTCGCCGA ACGCGCGGTG
CTGCCGCAGG GGACGTTGTA CGCGTCGACA CCGCATCAGA CCGTCGCGGT GGTGCCGTGG
CACGGCGACA ACGAGTCGAT CGACACCTTG CGGGTGCCGC TGCTGGAGGT GTGCACCAGG
CTCAGGGCCG CCGGACGCGC GGTCACTTTC GGTGTGTCCC AGCCTGTCTC GGCGCCGGCC
GAGCTCGCCG GCGCACTCGC CGAGGCTCGC GAGGCGATGG CGATCGGCAG TGGGCTGGAC
AACCCGAACG GGGTCTTCAC CCTCGACGAC GTCGGTCACC ACCTGCTGCT GATGCGGGTG
TCGGGCGTCG ACTCGATCCG CGACCGTTAC GCCACGGCGA TCGCGCGGAT CGCCGAGTAC
GACCGGGTGA AGGGCACCGA ACTGCTCGAG ACGTTGTCGG TGTTCCTGCA CTACCGCAGT
CAGAGCGCCG CGTCGCGGGA GCTGTATGTG CATCGCAACA CTCTCAACCA GCGGCTCACC
CGGGCGTCCA CGCTCAGCGA CGTCGACGTG CTGGAGCCGT CGGAGTGGTT CCCGTTGCAG
CTGGCGTTGA AGGTGCACCA GTCCCGTGCG GGAATGCCTA CCGGCGAGCC GCGGCGCCCC
CAGACCTACC CCGAACCGCG GGACGGCAGC GGATAG
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| Protein sequence | MPPGADTAEL RWAMPDEPLS QVELRAVAHL TRVLGSTDDV TAVAQGLAEA IQAGRVNRDV
YSYVYDTEAK ELVLTGATES PAAEHVGALR VAYGDGVTGW VAATKQSYLV PDEPARDPRF
LAYPGIGEER YGAIFSVPIV SPRGEPLGCI TVWATTGHRF DSGEVAFVER MAALVAPVFG
TARQRQTSSR LLLVGSGLTE LASMVASATP TGPTMDYAVE FLTEAAGLDV AVAFVTDPSG
VDRMHMKVST ESDRARPELD GQQLLLVEQG VRNGITDWRT ASQLVNRALD GVAGAVTSAP
MRVGPEEFGV IACYRLKPVR FTSEESAMVT AVANHAAVAI RLAVLSDELA ARNRLNWFLR
DLSSGRLGAE ELRRRAAAVG LDTANRHVFV VGSVSTKSMP HPESGPVSVA LGELLAERAV
LPQGTLYAST PHQTVAVVPW HGDNESIDTL RVPLLEVCTR LRAAGRAVTF GVSQPVSAPA
ELAGALAEAR EAMAIGSGLD NPNGVFTLDD VGHHLLLMRV SGVDSIRDRY ATAIARIAEY
DRVKGTELLE TLSVFLHYRS QSAASRELYV HRNTLNQRLT RASTLSDVDV LEPSEWFPLQ
LALKVHQSRA GMPTGEPRRP QTYPEPRDGS G
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