| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_1577 |
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| Symbol | |
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| ID | 4648618 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium vanbaalenii PYR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008726 |
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| Strand | + |
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| Start bp | 1667616 |
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| End bp | 1671083 |
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| Gene Length | 3468 bp |
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| Protein Length | 1155 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639805073 |
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| Product | polyprenyl synthetase |
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| Protein accession | YP_952413 |
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| Protein GI | 120402584 |
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| COG category | [H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase
[COG2409] Predicted drug exporters of the RND superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.141416 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCGTCAG GGACGACGCT GTCGTCAGAG CCGGCGCTCC GACCGGCGGT GATGGAGAAG
AGGCGCCGTC TGCTCCACCG AATTGCGTTG TGCGCCATCG CGGCACCGCG TCGCATCGTG
GCCATCGCGG CACTGGTCAT GGTCGGCGCC GCGATCTTCG GCGTGCCGGT GGCGGGCAGC
CTGGCCGCCG GGGGCTTCCA GGATCCGGGG TCGGAGTCGG CGCGGGCGAC CCGAGTCCTC
ACCGAGACGT TCGGCCGGGG CGACATGCAG CTGGTCTTCG CCGTCACCGA CCCGGCCGGC
GTCGACAGCG CCTCGGCGCG CGCTGCGGGC CTGGCCATCG CCACGCTCGT CGGCGAAGAT
CCGGCCGTCG CGGACGTGGT GTCGACGTGG ACGGTCGCGC CCGAAGCGGC CGCGGCCCTC
ATCTCCGCGG ACGGTCGCAG CGGGCTGGTC GTCGCCGAGC TGACCGGTGA CGAGAACACC
GCGCCGCGCA TTGCCCAGGC GCTCGTCGAC GAGGTGGCGA CGACGGTGCA GCCGCGCCAC
GAGACCGTCG CCGTGCTGGC CGGCGGTTCG TCGATCGTGT ACTCGCAGAT CAACTCCCAG
ACGCTGCGCG ACGTGCTGCT GATGGAGGCG ATCGCGATAC CGCTGACGTT CCTGGTGCTG
GTCTGGGTGT TCAAGGGCCT GCTGGCCGCG GCGCTGCCGG TGGCGGTCGG CGGATTGGCG
ATCGTGGCGT CGATGTCGGT GCTGCGGCTC GTGGCGATGT GGACCGACGT GTCGATCTTC
GCGCTGAACC TGACCACCGC GCTGGGCCTG GCGCTGGCCG TCGACTACAC CCTGTTGATC
GTCAGCCGCT TCCGCGACGA GGTCGCCGCC GGCGCGCCGC GCGACCGGGC GCTGGTCACC
ACCATGGTGA CGGCGGGCCG CACCGTGCTG TTCTCCGCGC TGACGGTGGC GCTGTCGATG
GCGGCGATGC TGCTGTTCCC GATGTACTTC CTGAAGTCCT TCGCCTACGC CGGCCTCGCG
ACCGTTGCGT TGTGCGCGGT GGCGGCGATC GTCGTCACCC CTGCGGTGAT CGCGCTGTTC
GGGGACCGGC TCGACGCGTT CGACATCCGC CGGATGCTGC GGCGGACCCC TGCGGCGGAG
CCGCGGGGAG AACAGATGTT CTGGTACCGC TCCACGAAGT TCGTCATGCG CCGAGCGCTG
CCGGTGGGGC TGGCGGGGAC CGCGCTGCTG GTGAGCCTGG GCCTGCCGTT CCTCGGCGTG
TCCTGGGGGC TGCCCGACGA CCGCGTGCTG CCGTCGTCGG CGACCGCGCA CCGGGTGGGC
GACATGCTGC GCACCGAGTT CTCCGACAAC TCCGAGGCGG CGGTGACGGT GCTGGTGCCC
GACGCCGAGG GCCTGACACC GCAGGACTTC GAACGCTACG CCGCCGAGGC GTCGACGATC
GAGGACGTGT CGATGGTCAG CGCGCCGACC GGCACGTTCG CCGACGGGCG GCGGGTCGGG
CCGCCTGCGG GCGGCGCCGG GGTGCAGGGC GGCATCGCCT ACCTGACGGT CGGCAGCACC
ACGGCGTCGT TCTCGCCGGA ATCCGAGCGC CAGCTCGACC GTCTGCGGGC ACTGCCGGGT
CCCGGCGGCC GGCCGGTCCA GATGACCGGC ATCGCCCAGA TCAACAGGGA CAGCGTCGAG
TCCATCATGG CGCGGCTGCC GATCGTGCTC GGCATCATCG CGGTGATCAC GTTCGTGCTG
CTGTTCCTGC TGACCGGCAG CCTGGTGCTC CCGGTCAAGG CCTTGGTGCT CAACGCGCTG
TCGCTGACGG CGGCGTTCGG TGCGCTGGTG TGGATCTTCC AGGACGGCAA TCTGGGCGCG
CTGGGGACGA CGCCGACGGG GACGCTGGTG GTCAACATGC CGGTGCTGCT GTTCTGCATC
GCGTTCGGCC TGTCGATGGA CTACGAGGTG TTCCTGCTGG CCCGCATCCG CGAGTTCTGG
CTCGCCGGCG GCCGGCGGGA CAACGACGAG AGCGTCGCCC TCGGCCTGGC GCACACCGGG
CGGGTGGTCA CCGCGGCGGC GCTGATCATG TCGATCTCGT TCGGCGCGCT GATCGCCGCG
CAGGTGTCGT TCATGCGGAT GTTCGGGCTC GGTCTGATGC TGGCGGTGCT GATCGACGCC
ACGCTGGTGC GGATGGTGTT GCTGCCTGCG TTCATGCATC TGATGGGCCG CTGGAACTGG
TGGGCACCGG CGCCGCTGGC CCGCTGGCAT GCCCGCAGAA CGGGTACTGC GGAACAAAAT
GCGAATCCGA CCAAATCCGG GGCCGCCATA GCTTCGAATG GAAGACGACG CCCAAGGCAC
GGGTGGGTCG AACGAGGAGG GGGTCCGCAG TTGAGCAGGG GCGATGGCGC CGGCGCGCAG
CTGGCAGAAC CAGGGCTGAT GGCCTGGCGC GACACGGTCC GCACGGCGGT GCGGGAACAT
CTGGAAGATT TCGTGCGCGG TGAATGCGCC CGCCGACTGG ACGGCGGCGG CGTCGATGTC
GCCGCCGAGC TGCTGTGCGG ATTCCTCGAC GGCGGCAAGT ACGTCCGCTC GACGTACATG
TATCTCGGCT GGTTGTGCGG CGAGCGGGAG GACACCGCGG CGCTGCGGGC GTCGGCGAGC
CTGGAGCTGC TGCACACCTT CGCGCTGATC CAGGACGACG TGATGGACAG CTCACCGATG
CGCCGGGCCC GGCCCAGCGC GCACGTCGCG CTGGGGCGCT GGCACCGCGA CCGCGCGCTG
AGCGGCTCGG CGAGCCGGTT CGGGGAGTCC GCGGCGATCC TGCTCGGCGA CCTGTGCCTG
GTGTGGGCCG AGGAGATGCT GCGCCGCAGC GGGGTCGACG CGGACGCGCT GGCCCGGGTG
TGGCCGCGCT ACGACGCCAT GCGCACCGAG CTCGCCATCG GCCAGCTGTC CGACCTTCTG
AACAGCTGCC AGACGTTCCC GACACTCCCG GAGGTACTTG ACGTGCTGCG CCGCAAATCC
GGCAACTACA CCGTGCGCCG TCCGCTGGAG CTCGGCGCCG CCATGGCCGG CTGCAGCGCC
GATGTGGCGG ACGCGCTGTC CGGCTACGGC GCCGCGATCG GGGAGGCGTT CCAGTTGCGC
GACGACATCC TCGGCGTGTT CGGATCGCCT TCGCTGACAG GCAAATCCGT GCGCAGCGAC
CTGGAGGACG GCAAGGCCAC CAGCATCGTC GTCGCCGCCT ACGAGCTGGC AGGCCCGAGG
CTGCGGCGCC AGCTCGCCGA ACTGATGCAG AGCCCCGAGA TCGGCGCCGC CGACGTCGAC
CGGTGGCGCA CCCTGATCAG GGCCAGCGGT GCCGTGCAGT GGATCGAGGA GCAGATCGCC
CGCCGCCACG ACGCGGCGCT GCGCTTCCTC GACGGCGCGG CGATCCCCGC CGCCCCCCGT
GCCGCGTTGG CCGAGATGGC CGTCGCCTGC ACCCAGCGGG CAGCATGA
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| Protein sequence | MPSGTTLSSE PALRPAVMEK RRRLLHRIAL CAIAAPRRIV AIAALVMVGA AIFGVPVAGS
LAAGGFQDPG SESARATRVL TETFGRGDMQ LVFAVTDPAG VDSASARAAG LAIATLVGED
PAVADVVSTW TVAPEAAAAL ISADGRSGLV VAELTGDENT APRIAQALVD EVATTVQPRH
ETVAVLAGGS SIVYSQINSQ TLRDVLLMEA IAIPLTFLVL VWVFKGLLAA ALPVAVGGLA
IVASMSVLRL VAMWTDVSIF ALNLTTALGL ALAVDYTLLI VSRFRDEVAA GAPRDRALVT
TMVTAGRTVL FSALTVALSM AAMLLFPMYF LKSFAYAGLA TVALCAVAAI VVTPAVIALF
GDRLDAFDIR RMLRRTPAAE PRGEQMFWYR STKFVMRRAL PVGLAGTALL VSLGLPFLGV
SWGLPDDRVL PSSATAHRVG DMLRTEFSDN SEAAVTVLVP DAEGLTPQDF ERYAAEASTI
EDVSMVSAPT GTFADGRRVG PPAGGAGVQG GIAYLTVGST TASFSPESER QLDRLRALPG
PGGRPVQMTG IAQINRDSVE SIMARLPIVL GIIAVITFVL LFLLTGSLVL PVKALVLNAL
SLTAAFGALV WIFQDGNLGA LGTTPTGTLV VNMPVLLFCI AFGLSMDYEV FLLARIREFW
LAGGRRDNDE SVALGLAHTG RVVTAAALIM SISFGALIAA QVSFMRMFGL GLMLAVLIDA
TLVRMVLLPA FMHLMGRWNW WAPAPLARWH ARRTGTAEQN ANPTKSGAAI ASNGRRRPRH
GWVERGGGPQ LSRGDGAGAQ LAEPGLMAWR DTVRTAVREH LEDFVRGECA RRLDGGGVDV
AAELLCGFLD GGKYVRSTYM YLGWLCGERE DTAALRASAS LELLHTFALI QDDVMDSSPM
RRARPSAHVA LGRWHRDRAL SGSASRFGES AAILLGDLCL VWAEEMLRRS GVDADALARV
WPRYDAMRTE LAIGQLSDLL NSCQTFPTLP EVLDVLRRKS GNYTVRRPLE LGAAMAGCSA
DVADALSGYG AAIGEAFQLR DDILGVFGSP SLTGKSVRSD LEDGKATSIV VAAYELAGPR
LRRQLAELMQ SPEIGAADVD RWRTLIRASG AVQWIEEQIA RRHDAALRFL DGAAIPAAPR
AALAEMAVAC TQRAA
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