Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mvan_1157 |
Symbol | |
ID | 4646721 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium vanbaalenii PYR-1 |
Kingdom | Bacteria |
Replicon accession | NC_008726 |
Strand | - |
Start bp | 1230907 |
End bp | 1231554 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 639804655 |
Product | TetR family transcriptional regulator |
Protein accession | YP_951998 |
Protein GI | 120402169 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.225528 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGACG GGCAAAAGCC TGCGCACATC CGTTTTGGCG AAAAGAGTTT GATGATGGAA ACTTGCCTGG TGTCGGCGCC TGATCGCTCC AGCAGTCTGC GCGAGCGGAA GAAGACACAG ACGCGTCTCG CGATACGCCG GGAGGCGTTC CGGTTGTTCG AGACGCAAGG ATATGCGAAT ACGACGATAG ATCAGATTGC CGAAGCCGCC GAAGTTTCAC CCAGGACTTT CTACCGATAT TTCGGAGTCA AAGAAGCGTT ACTCCTGTCC GACGATCAGC GTTCGCCCAT TGTCGAGGCA TTCGCCGGCG CGCCCCGGGA ACTGACGGTC GCGGCCGCCT ACCGGCACGC CGTGGAAGAG GTGCTCGGGG GGTTGTCCGC GGTGGAGCGC GTGGACGCCA TCGCCGGGCA ACGAATCCTC TACCAGGTGC CGGAGGCGCT CAACCTGGTC TACACCGAAT ACGTCGCGCT GATCGACTCG ATCGCCGACG TACTGAGAGA TCGCCTCGAG GAGGACGTGG ACGACCTCGA ACGACGTGTG ATCGCCGGCG CGGTGGTCGG TGTTGTCATC GCCGCGGCGC ACAACCAACC CCTACCGCAG GAGTCGGTGT CCAGGGCGCT GACCATCCTG GACACCCGGA TGTCGTAG
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Protein sequence | MADGQKPAHI RFGEKSLMME TCLVSAPDRS SSLRERKKTQ TRLAIRREAF RLFETQGYAN TTIDQIAEAA EVSPRTFYRY FGVKEALLLS DDQRSPIVEA FAGAPRELTV AAAYRHAVEE VLGGLSAVER VDAIAGQRIL YQVPEALNLV YTEYVALIDS IADVLRDRLE EDVDDLERRV IAGAVVGVVI AAAHNQPLPQ ESVSRALTIL DTRMS
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