| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mthe_1297 |
|---|
| Symbol | |
|---|
| ID | 4462938 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosaeta thermophila PT |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008553 |
|---|
| Strand | + |
|---|
| Start bp | 1402674 |
|---|
| End bp | 1403387 |
|---|
| Gene Length | 714 bp |
|---|
| Protein Length | 237 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 639700315 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_843715 |
|---|
| Protein GI | 116754597 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2122] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0893074 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATACGTG AGTATTTCAG ACTTCATCAG ACGATAGCCA CGATCGTGGC CAGATCGCAG
GAGCACATAG AGATCGCAAA GAGCGCGATA ATAGACAGCA GGACCCAGCT TGAGGAGTTC
ATAGCTTTCG ACCCTCTATT CCAGCTGACC CTCGTGCCCT ACGATCTCCC GGTAGATAAT
GCCCCGCCTA TTGTAAAAAG GATGTGCCAT GCATCGTCAC TCTTCCACGT CGGACCTATG
GCAGCTGTCG CCGGAGCGAT TGCAGCATTT GCAGTCGAGG CCATGGTGGA GGCGGGGGCT
GATTACGCTG TCGTTGACAA CGGTGGGGAC ATAGCGATCT TCTCGGATGA GCCTCTGCTT
GTTGGGATAT ACGCCGGCTC ATCTCCGATA AAGAATCTGG CACTTGAGAT CCATCCCACA
GGAGGAATCC TGGGGGTGTG CAGCAGCAGC GGGACCATTG GGCCGTCAAT AAGCTTCGGA
TGTGCAGATG TCGCGACAGT GATATCCAGA GATCCGGCGA TAGCAGATGC CGGCGCGACA
GCGCTCGGCA ATGCTGTCAC GCCAGATGCC AGCCTGAAGG AGTGCTTCAG TGTGGTTGAT
AGAGATGAGG TGATCGGAGC TTTGATCATA AGGGGTGATG AGATGGCGGT GTGGGGAGAG
GTACCGCCCA TACGGAGAGC GCGGGTCAAA TACGACCTCA TAACAAAGGG GTAG
|
|---|
| Protein sequence | MIREYFRLHQ TIATIVARSQ EHIEIAKSAI IDSRTQLEEF IAFDPLFQLT LVPYDLPVDN
APPIVKRMCH ASSLFHVGPM AAVAGAIAAF AVEAMVEAGA DYAVVDNGGD IAIFSDEPLL
VGIYAGSSPI KNLALEIHPT GGILGVCSSS GTIGPSISFG CADVATVISR DPAIADAGAT
ALGNAVTPDA SLKECFSVVD RDEVIGALII RGDEMAVWGE VPPIRRARVK YDLITKG
|
|---|
| |