| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mthe_0459 |
|---|
| Symbol | |
|---|
| ID | 4462616 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosaeta thermophila PT |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008553 |
|---|
| Strand | + |
|---|
| Start bp | 475961 |
|---|
| End bp | 476458 |
|---|
| Gene Length | 498 bp |
|---|
| Protein Length | 165 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 639699461 |
|---|
| Product | XRE family transcriptional regulator |
|---|
| Protein accession | YP_842890 |
|---|
| Protein GI | 116753772 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1813] Predicted transcription factor, homolog of eukaryotic MBF1 |
|---|
| TIGRFAM ID | [TIGR00270] conserved hypothetical protein TIGR00270 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGAGAGA TGAGCGATAG GCAATGTGAG ATCTGCGGCG CAGACATCTC TGGCTCTCCC
GAGAGGATAG TGATCGACGG CTCGGTTCTT GAGGTCTGCA AGAGCTGCGC TCGCTTCGGC
AAGCCTGAGG ACAAATGGTC TCCTGTTCCG AGAAAGATCG TGCCTGTTGA GAGGAGCTTT
CGCGTGCAGA AGCCAAAGCC ACGCGACCAC TTCAGGGATC TGGTGGAGGT AGTGCCGGAT
TACGGGAATA TTATAAAAAA TGCCAGGGAG AGCATGAATC TCTCTCTCGA GGATCTGGCT
CTCAGGATAA AGGAGAAGGC ATCTCTTCTC AGAAAGATCG AGCGCGAGGA GCTCGTCCCG
GAGGACGATG TGAGGAAGAA GCTGGAGAAG GAGCTCAAGA TAAAGCTCAC CGAGGAGACG
ACCGAGGAGA AGCTCAAATC CCGGGGAGGA TCGAAGGTTC TGACGCTCGG GGATATCGCA
AACATCAGGA AGAGATGA
|
|---|
| Protein sequence | MREMSDRQCE ICGADISGSP ERIVIDGSVL EVCKSCARFG KPEDKWSPVP RKIVPVERSF
RVQKPKPRDH FRDLVEVVPD YGNIIKNARE SMNLSLEDLA LRIKEKASLL RKIEREELVP
EDDVRKKLEK ELKIKLTEET TEEKLKSRGG SKVLTLGDIA NIRKR
|
|---|
| |