Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mthe_0262 |
Symbol | rfc |
ID | 4462792 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosaeta thermophila PT |
Kingdom | Archaea |
Replicon accession | NC_008553 |
Strand | - |
Start bp | 261881 |
End bp | 262798 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 639699268 |
Product | replication factor C small subunit |
Protein accession | YP_842699 |
Protein GI | 116753581 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0470] ATPase involved in DNA replication |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0941959 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGGCCAGC CGGAGATAGT CAGGCGCCTC AAGTCGTACG TGGCCACGAG AAACCTGCCC CATCTCCTCT TCTCAGGGCC GCCGGGTGTC GGGAAGACAG CGGCTGCGAT CAGCATAGTG CGCGAGATAT TCGGCGAGGG ATGGAGGGAT AACTTCATCG AGCTAAATGC ATCCGACGAG CGCGGCATAG ATGTCGTCCG CACGAAGGTC AAGGACTTCG CCCGGATGGC GCCTCTGGGA GGGGCTGAGT TCAAGGTGAT ATTTCTGGAT GAGGCGGACG CACTGACAAG CGATGCACAG TCCGCTCTCA GGAGAACCAT GGAGAGATAC AGCGCGACAT GCAGATTCAT CCTCTCCTGC AACTACTCCT CGAAGATCAT AGAGCCGATA CAGTCGAGGT GCGCTGTATA CCGCTTCAGG GCTCTTACCC CTGATGCCAT CGAGAAGAGA ATAAGGTATA TCGCGGAGCA GGAGGGTGTG GAGGTAACGG AAGACGGCAT CGAGGCCATA AACTATGTGG CGAGGGGGGA TATGCGGAAG GCGATAAACG CGCTCCAGGC CGCGGCCCTG ATAAGCGATA AGGTGGACAT GAACACTATC TATCAGATAA CATCGATGGC GAGGCCTGAG CAGATCAGGA ATCTGATAAA AATGGCGATA TCCGGGGATT TTGCGGGCGC GAGAAACGAG CTCGACGATC TTCTCCTTGT ACAGGGGCTC TCAGGCCAGG ATGTGGTGGT CCAGATCCAC CGTGAGATGC TCGATCTGGA TGTGCCTGAT GCAGATAAGG TCAGGATGAT CAACCGGATT GGAGAGATCG ACTTCAGGAT AACAGAGGGG GCGAACGAGA GGATACAGCT TGAGGCGCTG ATAGCCTACA TGGCCCTCAC AGGGCTGTCA AAGTCGACTG CCACGTGA
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Protein sequence | MGQPEIVRRL KSYVATRNLP HLLFSGPPGV GKTAAAISIV REIFGEGWRD NFIELNASDE RGIDVVRTKV KDFARMAPLG GAEFKVIFLD EADALTSDAQ SALRRTMERY SATCRFILSC NYSSKIIEPI QSRCAVYRFR ALTPDAIEKR IRYIAEQEGV EVTEDGIEAI NYVARGDMRK AINALQAAAL ISDKVDMNTI YQITSMARPE QIRNLIKMAI SGDFAGARNE LDDLLLVQGL SGQDVVVQIH REMLDLDVPD ADKVRMINRI GEIDFRITEG ANERIQLEAL IAYMALTGLS KSTAT
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