| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mthe_0109 |
|---|
| Symbol | |
|---|
| ID | 4462501 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosaeta thermophila PT |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008553 |
|---|
| Strand | + |
|---|
| Start bp | 101609 |
|---|
| End bp | 102991 |
|---|
| Gene Length | 1383 bp |
|---|
| Protein Length | 460 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 639699118 |
|---|
| Product | (R)-citramalate synthase |
|---|
| Protein accession | YP_842551 |
|---|
| Protein GI | 116753433 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
|---|
| TIGRFAM ID | [TIGR02090] isopropylmalate/citramalate/homocitrate synthases |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGATGAAC TGGGCGTTGA TGTGATCGAG GCCGGCTCTG CAATAACATC CGATGGGGAG
CGAGAGTCGA TCCGTGCCAT CGCGTCTGCA GGGCTGAACG CCGAGATATG CTCTTTTGCG
CGTGCACATC GGAAGGACAT CGACGCGGCG CTTGATTGCG ATGTCGATTC TCTGCACCTC
GTCGTTCCGG TCTCAGATCT CCACATCGAG AGGAAGCTGA GATCCGACAG GGAATCGGTG
CTCAGAAAGG CTGTTGAGGC CACAGAGTAT GCAAAGGCGC ATGGCCTGAT CGTCGAGCTC
AGCGGCGAGG ACGCGAGCAG AGCCGATCTC GATTATCTAG AATCAATTTA CAGAGCCACA
ATCGAGGCCG GAGCAGACAG GCTCTGCTTC TGCGATACCG TGGGCGTGCT TCTTCCTGAG
AGGACTGCAG AGATATTCCA GCGTCTGAGG TCTCTGGGAA AACCAGTGAG CATCCACTGC
CACGACGACT TCGGGATGGC CACCGCGAAC ACTGTAGCAG CACTCAGAAA CGGCGCTATG
CAGGCGCATG TCACCATCAA CGGCCTCGGC GAGCGCGCTG GCAACACCAG CCTGGAAGAG
GTCGTGATGT GCCTGGAGAA TCTTTATGGT ATCAGGACAG GCATAAAGTG CAATCTTTTA
TATCAGATCT CCAGAGTTGT CTCGAAGAAG ACCGGCATAC CTGTGGCGCC GAACAAGGCG
ATCGTCGGGG AGAATGCATT TACGCACGAG GCCGGCATAC ACGTCCATGG TCTGATCGCA
GACACGTCCA CATACGAGCC GATGCGCCCG GAGCAGGTCG GCAGGAAGAG GCGGATCGTG
CTCGGGAAGA TGTCAGGGAG AGCAGCTGTT GAGCTTGCCC TCAGGGAGTT CGGGATCACA
GTAAATGAGG AACAGCTGAA CGAGATAGTG AGCAGGGTCA AGGAGCTTGG CGATAAGGGC
AAACGGGTCT CGGATGCGGA TCTTCAGTCG ATAGCCGATA CGGTGCTCTC AAGGGAGCTG
AAGCCCAGGG TGCTTCTGGA GGAGCTGACC GTGGTCAGCG GGAACAGGGT GACGCCGACA
GCGAGCGTGA AGCTGATCCT CGATGGGAGA GAGACACTAG AGGCCGGTGC AGGAGTCGGG
CCTGTGGACG CTGCTGTGAA TGCTGTCAGA AGGGCCATAT CGGGCGTAAC AGATATTCGC
CTTGAGGAGT ACCATGTGGA TGCCATTACG GGTGGAACAA ATGCCCTGGT CGAGGTATGG
GTGACGATGG CTATAGGAGA TAGAAGCATA ACAGCCAGGG GCGCAGGGGC TGATATCATA
ATGGCCTCCG TCGAGGCTGT TCTGGAAGGT ATAAACAGGC TGATGCTTTT GGAGGATAGA
TGA
|
|---|
| Protein sequence | MDELGVDVIE AGSAITSDGE RESIRAIASA GLNAEICSFA RAHRKDIDAA LDCDVDSLHL
VVPVSDLHIE RKLRSDRESV LRKAVEATEY AKAHGLIVEL SGEDASRADL DYLESIYRAT
IEAGADRLCF CDTVGVLLPE RTAEIFQRLR SLGKPVSIHC HDDFGMATAN TVAALRNGAM
QAHVTINGLG ERAGNTSLEE VVMCLENLYG IRTGIKCNLL YQISRVVSKK TGIPVAPNKA
IVGENAFTHE AGIHVHGLIA DTSTYEPMRP EQVGRKRRIV LGKMSGRAAV ELALREFGIT
VNEEQLNEIV SRVKELGDKG KRVSDADLQS IADTVLSREL KPRVLLEELT VVSGNRVTPT
ASVKLILDGR ETLEAGAGVG PVDAAVNAVR RAISGVTDIR LEEYHVDAIT GGTNALVEVW
VTMAIGDRSI TARGAGADII MASVEAVLEG INRLMLLEDR
|
|---|
| |