| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_3776 |
|---|
| Symbol | |
|---|
| ID | 7090704 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylocella silvestris BL2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011666 |
|---|
| Strand | - |
|---|
| Start bp | 4134390 |
|---|
| End bp | 4135133 |
|---|
| Gene Length | 744 bp |
|---|
| Protein Length | 247 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 643467061 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_002364020 |
|---|
| Protein GI | 217979873 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGACA GCAGCAGCAA CAAAATTGCG ATCGTGACGG GCGCCTCGCG CGGCATTGGC
GCGGCGGTGG CGACCCGGCT CGCCGCCGAC GGCTTCACCG TCGTCGTGAA TTATTCCAGC
GAAGCCGCGC CAGCGGAAGC GCTAACCCGT GAGATCGAAG CCAGGGGCGG CCGGGCTCTA
AGCGTCAGAG CCGACGTCAG CGACGCGCAA GCCGTGCGGA GCACGTTCGA CGCCACGGAG
GCGGCCTTCG GCGGCGTCGA CGTGCTCGTC AACAACGCTG GAATCATGGC GCTTGCCGCC
ATCGCCGATA CGGATGACGC CAGCTTCGAG CGCCAGATGA ACGTCAATCT CAAAGGGACG
TTCAATACGC TGCGCGAGGC GTCGCGGCGG CTGCGCGACG GCGGCCGCAT CATCAATTTA
TCGTCGAGCG TCGTCGGCTT GCTGCAACCG ACCTATGGCG TCTATGCGGC CACGAAAGCA
GCCGTCGAAG CAATGACGAG CGTCCTCGCC AAGGAGCTCC GCGGACGCTC CATCACGGTC
AACGCCGTGG CGCCGGGTCC GACCGCGACC GATCTCTTCT TGAACGGCAA ACCGGAAGAA
CTCGTTGAAC GTCTGGCGAA GCTCGCGCCG CTCGAAAGGC TCGGCCAACC CGCCGACATC
GCTGCGGCGG TCTCTTTTCT CGCGGGTCCC GACGGCGCCT GGATCAATGG CCAGACATTG
CGCGCCAATG GCGGAATTAT CTGA
|
|---|
| Protein sequence | MTDSSSNKIA IVTGASRGIG AAVATRLAAD GFTVVVNYSS EAAPAEALTR EIEARGGRAL
SVRADVSDAQ AVRSTFDATE AAFGGVDVLV NNAGIMALAA IADTDDASFE RQMNVNLKGT
FNTLREASRR LRDGGRIINL SSSVVGLLQP TYGVYAATKA AVEAMTSVLA KELRGRSITV
NAVAPGPTAT DLFLNGKPEE LVERLAKLAP LERLGQPADI AAAVSFLAGP DGAWINGQTL
RANGGII
|
|---|
| |