| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_3500 |
|---|
| Symbol | |
|---|
| ID | 7092524 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylocella silvestris BL2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011666 |
|---|
| Strand | + |
|---|
| Start bp | 3845387 |
|---|
| End bp | 3846406 |
|---|
| Gene Length | 1020 bp |
|---|
| Protein Length | 339 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 643466791 |
|---|
| Product | amidohydrolase 2 |
|---|
| Protein accession | YP_002363751 |
|---|
| Protein GI | 217979604 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2159] Predicted metal-dependent hydrolase of the TIM-barrel fold |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.0215706 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGGAA AAATTGCACT CGAGGAGCAC TTCGTGTCGG AAGACGCGAA GGCCTATTTG
CCGGCGCTCG GGGTGAGGCC CGAAGTCCAG AAAAGGATCG ACGACGGTCT CGTCGACGTC
GAGCAATATC GGTTGCCGGA CATGGACGCG CATGGCGTCG AAATGCAGCT GGTGTCATTG
ACTGCGGACG GCGTCCAGAT AGAGCCCGAT CGCGACAAGG CCGCCATGAT CGCCAGCCGC
GCCAATGATG AGCTCGCGGA GCGCTTTGTC GCCAGACATC CGACGCGCTT CGCTGGCTTT
GCCGCCGTCG CGCTTCAAGA TCCGAAAGCC GCGGCGGATG AACTCGAGCG CGCGGTCAAG
CAGCTGGGAT TTGTCGGCGC GCTTGCGAAT GGCTTCAGCA ATATCGGCGA TCTCGATACC
GGCGAATATT ACGATCTGCG CAAGTTTCTG CCGTTCTGGG AGCGCGTCGC TGATCTCGGC
GTTCCATTCT ACCTGCACCC GCGCGGCCCT CTCGACTCGC AGCAGATGAT CTATGACGGC
CACAAGGAGC TTCTTGGCCC CGCTTGGGCC TTTGGGGTCG AAACAGCGAC CCATGCGCTG
CGGCTGATCA CAAGCGGGCT GTTCGACCGC TTTCCCAAGC TGACAATCGT CATTGGCCAT
CTTGGCGAGG GCCTTATTCC CATGATGTGG CGCTTTCAGA ACCGCTTCGA CTACGCTTCA
TTCGGCAGGA GGCTGCAAAA GCCGGTCGCG CAATATCTCA AGGATAATTT CTACATCACC
ACCAGCGGCA ATTTTCATAC GCCGACCTTG TTGAACGTCA TCGCCGAAAT AGGCGCGGAT
CGCGTGATGT TTGCGATCGA CTATCCCTAT GAGCGGACGG AGCAGGCGGT TGAATGGTTC
GACCATTGCG CCATCAGCGA AGAAGATCGC CAGAAAATTG GACGGTTGAA TGCGCAGCGG
CTATTCAAAC TAAGTCCAGC CCACGAGCAA GAAGGTCAGC TTCACTGGAG GTCCGCGTGA
|
|---|
| Protein sequence | MIGKIALEEH FVSEDAKAYL PALGVRPEVQ KRIDDGLVDV EQYRLPDMDA HGVEMQLVSL
TADGVQIEPD RDKAAMIASR ANDELAERFV ARHPTRFAGF AAVALQDPKA AADELERAVK
QLGFVGALAN GFSNIGDLDT GEYYDLRKFL PFWERVADLG VPFYLHPRGP LDSQQMIYDG
HKELLGPAWA FGVETATHAL RLITSGLFDR FPKLTIVIGH LGEGLIPMMW RFQNRFDYAS
FGRRLQKPVA QYLKDNFYIT TSGNFHTPTL LNVIAEIGAD RVMFAIDYPY ERTEQAVEWF
DHCAISEEDR QKIGRLNAQR LFKLSPAHEQ EGQLHWRSA
|
|---|
| |