Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msil_3348 |
Symbol | |
ID | 7090845 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylocella silvestris BL2 |
Kingdom | Bacteria |
Replicon accession | NC_011666 |
Strand | + |
Start bp | 3680185 |
End bp | 3680901 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 643466655 |
Product | transcriptional regulator, LuxR family |
Protein accession | YP_002363616 |
Protein GI | 217979469 |
COG category | [K] Transcription |
COG ID | [COG2771] DNA-binding HTH domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAATCATG ATCTGATCGA GCAAATTGAG GGCTGTTGGG CCGATGGCGG ATTAGAAGAG CTGCTGGAGC TCGTCTGCCG CAGCTATGAT CTGTTTTCCG TCATATATAT CTGCCCGTCT TTCATCGGAT TCAGTCTTTC CGCTCCGTTT ATTGTTCAAC CGCCTTGCCG AGGTTGGGCC GATCAGCAAA AAATCCAGTC GCTCCTGTCG ACGGATCCGA TGGTTCGGGC GATGTCGCGC ACTGTGCTGC CGATGGACTG GGCCGCTCTT CGGCAAAAGA GCGCGCACGA AACCGGAATT CACTTCCTGC CGGGCGAGGA TGGCGCTCTG CGGCAAGGCC TGACGATCCC TGTGCGTGGT CCCTCGAACA GTGTTTGGGG GCTTTTCATC GCTACATCGA ACGAAAGCGA AATTTGCTGG GCGTCACGTC GGCATGAGCT GATGATCGAC CTGGCTCATA TCGCGCATTA TGTCCATAAG CGCGCATGCG ACATACATGG CGAGGGGCAC ACGATCGATC TCAGCACGAT CACGCGCCGC GAGATCGAGG CGCTCGCGCT TGTGGCGCAA GGCAAAAAGC CTGGCGAGAT CGCAATGCTC ATGCGAATTT CGAACGACAC GGTCAAGGCG CATCTCGATT CGGCCCGCGA CAAGCTACAG GCGCTCAATC GCGTACATGC GGCCGCAAAG GCGCTGCGAG CCGGGCTCAT TTCATGA
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Protein sequence | MNHDLIEQIE GCWADGGLEE LLELVCRSYD LFSVIYICPS FIGFSLSAPF IVQPPCRGWA DQQKIQSLLS TDPMVRAMSR TVLPMDWAAL RQKSAHETGI HFLPGEDGAL RQGLTIPVRG PSNSVWGLFI ATSNESEICW ASRRHELMID LAHIAHYVHK RACDIHGEGH TIDLSTITRR EIEALALVAQ GKKPGEIAML MRISNDTVKA HLDSARDKLQ ALNRVHAAAK ALRAGLIS
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