Gene Msil_3230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsil_3230 
Symbol 
ID7090645 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylocella silvestris BL2 
KingdomBacteria 
Replicon accessionNC_011666 
Strand- 
Start bp3543263 
End bp3543703 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content70% 
IMG OID643466538 
ProductCMP/dCMP deaminase zinc-binding 
Protein accessionYP_002363499 
Protein GI217979352 
COG category[F] Nucleotide transport and metabolism
[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0590] Cytosine/adenosine deaminases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.00262263 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGACCGATC CCATGTCCGC CGCCTTTGAA GAGGCCGAGG CCGCCTTCGC GCGAGGAGAA 
GTGCCCGTCG GCGCGGTCAT CGTCCGGGAC GGCGCCATTC TGGCGCGCGC GGGCAATCGG 
ACCCTCGCCG ACGACGACCC AACCGCGCAT GCCGAAATGC TAACAATCCG CGCGGCGGCC 
AGGGCGCTCG GCTCGCAGCG GCTCGCGGGC TGCGATCTTT ACGTGACGCT GGAGCCCTGC 
GCCATGTGCG CGGCGGCGAT CTCTTTCGCG CGCGTGCGCC GGCTTTATTT CGCCGCCCTC 
GATCCGAAAG GCGGGGCGGT CGAGCACGGC CCGCGCTTTT TCGCGCAACC CACCTGCCAC 
CACGCGCCGG AGGTCTATGA GGGATTGCGC GCGAGCCAGT CGGCTGACTT GCTGCGGCGG 
TTTTTCGCGG AGAGGCGGTA G
 
Protein sequence
MTDPMSAAFE EAEAAFARGE VPVGAVIVRD GAILARAGNR TLADDDPTAH AEMLTIRAAA 
RALGSQRLAG CDLYVTLEPC AMCAAAISFA RVRRLYFAAL DPKGGAVEHG PRFFAQPTCH 
HAPEVYEGLR ASQSADLLRR FFAERR