Gene Msil_3001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsil_3001 
Symbol 
ID7093496 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylocella silvestris BL2 
KingdomBacteria 
Replicon accessionNC_011666 
Strand+ 
Start bp3315873 
End bp3316310 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content66% 
IMG OID643466312 
ProductCMP/dCMP deaminase zinc-binding 
Protein accessionYP_002363274 
Protein GI217979127 
COG category[F] Nucleotide transport and metabolism
[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0590] Cytosine/adenosine deaminases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value0.341603 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTTCGC GCGCGACCGA CGAGCGCTTC ATGCGCGCGG CGCTGAAAGA AGCGGCGCTG 
GGCGATTTTC CCTTTGGCGC GCTGATCGCG CAAGATGGCG AAACCATCGC CACCGGCCGC 
AATCTCGGCG AGACCAATGA TGATCCAACG GCGCATGCGG AAATGGTGGC GCTGCGCGGC 
GTCATCGCCG CCTATGGCGC CGCGCGGCTC CGGGATTCGA CGCTTTACGC CACCGGCGAG 
CCGTGCCCGA TGTGCATGGG CGCGATCATC TGGTGTGGCG TCGGGCGGCT GGTCTACGCC 
GCCTCGATCG AGCAATTGGC GCAGCGGATC GGACAGATCG AGACGCCGTG CCGCGATCTT 
GCTCGCCGCG CGTCTTTCAC GGAGATCTGC ATCGAGGGCG GCCTGTTGGC CGACGAGGCG 
ATGGCGTTGT TCGACTAG
 
Protein sequence
MISRATDERF MRAALKEAAL GDFPFGALIA QDGETIATGR NLGETNDDPT AHAEMVALRG 
VIAAYGAARL RDSTLYATGE PCPMCMGAII WCGVGRLVYA ASIEQLAQRI GQIETPCRDL 
ARRASFTEIC IEGGLLADEA MALFD