Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msil_2616 |
Symbol | |
ID | 7093270 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylocella silvestris BL2 |
Kingdom | Bacteria |
Replicon accession | NC_011666 |
Strand | + |
Start bp | 2859500 |
End bp | 2861524 |
Gene Length | 2025 bp |
Protein Length | 674 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 643465931 |
Product | surface antigen (D15) |
Protein accession | YP_002362901 |
Protein GI | 217978754 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0729] Outer membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 0.69192 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTTTAT CGAGACGAAA GATGGCAAGC CGCGTCCTGT TCGGCCCCCC TCTCGCAGCG GCGCTTGCGC TGGCGGCCGG GGCGTCGGCG CCGCAACCCG CCGCCGCTTT CGATTTCTTC GGGCTCTTTG GCTCGGACGA GCCGCCCGCG CCCACCCCCA CGACGGCGCC TTACAAAGTC GAATTCGTCA TCCGCGGCGA TGACAGCGTC AAGCAATCGC TGCAGGACGC CTCCCATCTT TATAAATTGC GCCAGGATCC GCCGCCCGAC GCCGCGGCGC TGGCGCAGCG GCTTGCCGCC GATTTCGCGC CCATGCTCGA TGCGCTCTGG GCGTCCGGCT ATTACAATGC GCGGATTTTC GCCCGCGTCG GCGATGTCGA ACGCGAACTC AAGGGCGCGG ATCCCGAGGC TTTCGCCAGA GCCGCAAGCG CTTTCGCCGG CCGCGCGGTC GCGCCCGTGA CGATCACCGT CGAGACGGGC GAATTGTTCC GTCTGCGCGA CGTCTCCGTC CTCGATTCAG CGACGCGCGC GCCTTTTCCG CCCGAAACCC TGCCGCTCTA TGTCCTGAAG CTGAAACCCG GCGATCCGGC CAGAGCCGCT GATCTGCGCG CCGCCAACGC CAGGCTGATC GATTTTTTTC GCGGCAAATC CTACCCGCTG GTCAAGGCGC CGCTGCCGCA GCCGGTCGTC AACCATGCGA CCTTGACGAT GGATGTCGCC TTTACCGTCG ATCCGGGGCC GCAGGCGGGG TTCGGCGCGG TGTCGATCAG CGGCCCGCAG GGCTTTGATC CGTCGATCGT GCGGTCTTTC ACCTATCTGC GCGAGGGCCA GCCCTATACG CCGAAGGCGC TCGCCGAGAC GCGCAGATCG ATCAGTTCGA TCGCCGCCGT CGGTTCGGTC CGTATCCGCG AGGGCGACAA GCTCGACGCC AACGGCAATC TGCCGATCTT CATCGAGGTC GGCGACCGCC CAAATAATCT CGTCGGCTTC ACCGCCGGCT ATTCCACCGT CGATGGTCCG ACCGGCAGCC TCTATTATGA GAACCGCAAT CTGTTCGGCG GCGCCGAAAG CCTCCGTCTT GAGGGCGATG TTTTCTATGC GCCGCCGATC TATGGCGTCG CCTCGAACAG CTTCAACAGT TTCAGCGGCC CGCAGAATTT CGACAGTTCC GGCATTGGCG GCAGAGTCTC GGCGAGTTTC GTCAAGCCGG CCCTGGCCGG TTCGCGGGTC GATCTGCTGC TCGGCGCCGC CGCGGAAAGC AATCGCTCCG GCGGCGGCAG TTTCGGCGGC TACGCCTGGC AGGACGCCGG CGGCACGGCG GCTCTGCGCT ATCGCATCGA CGAGACGCTG TCCCTGCAGG CCGGGCTCAA ATTCGAGAAA GGCGAGGCGA CCGACGCGCT TGGGACCGTG AATTATACGT TTCTCGGCAT TCCGCTCACC CTGAAGTATG ACGGAACCGA CAATCTGCTC AATCCGAGCA ACGGCTTTCG CGTCGCGGCG ACGGTGACGC CCTACCCGAA TGTGTTCGGC AACGCCGGCT TCACCAAGGC GAGCGTTACA GGATCGGCCT ATTACGCGAT CGACGAGGAC GCGAATTATA TTCTTGCCGC CCGCGCCGGC ATCGGCTCGA TCTTCGGCAA TGACGGCGGC CTCGCCGCCA TCCCGGCCAA TTATCGCTTC TACGCCGGCG GCCTTGCGAC GGTGCGCGGC TACCGCTACC AGACGATCGG GCCGCAGACG CCGCTGGGCT ACACGGTTGG CGGCCTCAGC GCCTTCAACG CCGGGGTCGA AGCGCGCATC AAGGTGTGGG ACAATATCGG CGTCGCGCCC TTTTTCGACG CCGGCGGGGC CTATTGCGAC TCCATCCCCC ACGGCGGCTG CGGCGACACG CGTTTTTCCG CCGGCCTCGG TCTCATCTAT TACACGCCGA TCGGCCCGAT CCGGGTCGAT GTCGCCAAAC CGCTCGATCC GCGTCCGGGG GATTATCCTG TCGTTTTCTA CGTCAGCATA GGGCAGCCCT TTTGA
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Protein sequence | MRLSRRKMAS RVLFGPPLAA ALALAAGASA PQPAAAFDFF GLFGSDEPPA PTPTTAPYKV EFVIRGDDSV KQSLQDASHL YKLRQDPPPD AAALAQRLAA DFAPMLDALW ASGYYNARIF ARVGDVEREL KGADPEAFAR AASAFAGRAV APVTITVETG ELFRLRDVSV LDSATRAPFP PETLPLYVLK LKPGDPARAA DLRAANARLI DFFRGKSYPL VKAPLPQPVV NHATLTMDVA FTVDPGPQAG FGAVSISGPQ GFDPSIVRSF TYLREGQPYT PKALAETRRS ISSIAAVGSV RIREGDKLDA NGNLPIFIEV GDRPNNLVGF TAGYSTVDGP TGSLYYENRN LFGGAESLRL EGDVFYAPPI YGVASNSFNS FSGPQNFDSS GIGGRVSASF VKPALAGSRV DLLLGAAAES NRSGGGSFGG YAWQDAGGTA ALRYRIDETL SLQAGLKFEK GEATDALGTV NYTFLGIPLT LKYDGTDNLL NPSNGFRVAA TVTPYPNVFG NAGFTKASVT GSAYYAIDED ANYILAARAG IGSIFGNDGG LAAIPANYRF YAGGLATVRG YRYQTIGPQT PLGYTVGGLS AFNAGVEARI KVWDNIGVAP FFDAGGAYCD SIPHGGCGDT RFSAGLGLIY YTPIGPIRVD VAKPLDPRPG DYPVVFYVSI GQPF
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