| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_2401 |
|---|
| Symbol | |
|---|
| ID | 7093953 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylocella silvestris BL2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011666 |
|---|
| Strand | + |
|---|
| Start bp | 2615544 |
|---|
| End bp | 2617172 |
|---|
| Gene Length | 1629 bp |
|---|
| Protein Length | 542 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 643465723 |
|---|
| Product | formylmethanofuran dehydrogenase subunit A |
|---|
| Protein accession | YP_002362693 |
|---|
| Protein GI | 217978546 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1229] Formylmethanofuran dehydrogenase subunit A |
|---|
| TIGRFAM ID | [TIGR03121] formylmethanofuran dehydrogenase subunit A |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 47 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCACAC TTTTGAAAGG CGGCCGGGTC ATCGATCCCT ACAATGGGCG TGACGAGATC
GGCGACGTCT GGATCGAGGA CGGCCATATC GTCGCCCCGC CCAAGAGCCG GCAGGCCGAC
GCGACTCATG ACGTCGCCGG CAAGATCGTC ATGGCGGGGG CGATCGACAT CCATTCCCAC
ATCGCCGGCG GCAATGTGAA CACCGCCCGG CTGCTGCTGC CGGAGCTGCA TCGCGCCCGC
ATGGCGCCGA TGCTGCCGCT CGGCACGGCG AAATGGTCGA CCTATGAGAC CGGGACGATC
TACGCGGGAA TGGGCTTCAC CACAGTGGTC GAGCCGGCCG TCGCTCCGCA TCAGGCGCTA
CAGGCGCATC TCGAATTGTC GGATATCCCG ATCATCGACA AGGCGACCCT GACCATCCTC
GGCAATGATG ATTTTCTGCT GAGCCTGCTT CGCGACGGCG AGAGCTCGGC GGCCGTTGCG
GATTATGTCG CGGCGACCTT GACGGCGACC AACAGCCTCG GCCTCAAATG CATCAACCCC
GGCGGCGCCG AGGCGTTCAA ATTCAACGCC CGCACGTTCG GCCTCGACGA CGTCGTGCCC
TTCTACGGCC TGTCCTCGCG ACAGATCATG CAGGCGCTGC AACAGGCGCT GGTCGATCTC
AAGGTGCCGC ATCCGCTGCA TCTCCACACC AACAATCTCG GCGTGCCGGG CAATGTCGCA
ACCGCGCTCG CAACGATCGA GGCCGCGCGC GGCATGCCGC TGCACCTCGC CCATATGCAA
TTCTATGGCT ATGGCTCGGA GGGCGAGCTC GGCTTCTCAT CGGCGGCCTC GACCCTCGCC
GCGGCCGTTA ACGCCACGCC GAATGTGACG ATCGACATCG GTCAGGTGAT GTTCGGACAG
ACGGTGACGA TTTCGTCAGA CGTCCTGCGC CAATATAGCG CGACCGGCAG CGCGAAGCCG
AAGAAGTCGG TGATCTATGA CGGCGACGCC AATGGCGGCG GCATCGTGCC CTACCTCTAC
CGCGAGGGCG ATTTCGTCAA CGCCATCCAA TGGGCCTGCG GCCTCGAACT CTTCCTGCTG
ATCACCGACG CCAACCGCAT CTTCTTCACG ACCGACCATC CGAACGGCGC GCCCTTCACC
GCCTATCCGG ACATTTTCGC GCTGCTGATG AGTCGCGACA AGCGAACTGA GGTGTTGTCG
CGCGTGCCGC AGGGCGCGGT GGCGCTGACC TCGCTGCCTT CGATCACGCG CGAATATGAT
TTCAACGACA TCGCCAAAAT GACCCGCGCC GCGCCGGCGA AACTGTTCGG CTTCAAGGAT
CGCGGCCAGC TTGGCGAAGG CGCCGTTGCT GACGTCGCCG TCTACAGCCC GGGCGAAGAC
ATCGCCAAAA TGTTCCGCCG CGCCCATCTC GTCTTCAAGG ATGGCGATCT CGTCGTGCGC
GACGGCGAGA TCAGCCATTA TCGCTGGGGC AAGGCGCTCA AGGTTCGGCC GGAGTACGAC
AAGGCGATCA ACAAGCGCCT TGCTTCCTAT TATGAGCATC ATTACGGCGT GTCGCATAAT
ATGTTCGCCG TGCCGGAGCA TATCCTGCCG CGCAACAATC CGTTCAAGGA GGTCGCATGC
GCGCTATGA
|
|---|
| Protein sequence | MLTLLKGGRV IDPYNGRDEI GDVWIEDGHI VAPPKSRQAD ATHDVAGKIV MAGAIDIHSH
IAGGNVNTAR LLLPELHRAR MAPMLPLGTA KWSTYETGTI YAGMGFTTVV EPAVAPHQAL
QAHLELSDIP IIDKATLTIL GNDDFLLSLL RDGESSAAVA DYVAATLTAT NSLGLKCINP
GGAEAFKFNA RTFGLDDVVP FYGLSSRQIM QALQQALVDL KVPHPLHLHT NNLGVPGNVA
TALATIEAAR GMPLHLAHMQ FYGYGSEGEL GFSSAASTLA AAVNATPNVT IDIGQVMFGQ
TVTISSDVLR QYSATGSAKP KKSVIYDGDA NGGGIVPYLY REGDFVNAIQ WACGLELFLL
ITDANRIFFT TDHPNGAPFT AYPDIFALLM SRDKRTEVLS RVPQGAVALT SLPSITREYD
FNDIAKMTRA APAKLFGFKD RGQLGEGAVA DVAVYSPGED IAKMFRRAHL VFKDGDLVVR
DGEISHYRWG KALKVRPEYD KAINKRLASY YEHHYGVSHN MFAVPEHILP RNNPFKEVAC
AL
|
|---|
| |