| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_2006 |
|---|
| Symbol | |
|---|
| ID | 7094204 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylocella silvestris BL2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011666 |
|---|
| Strand | - |
|---|
| Start bp | 2178742 |
|---|
| End bp | 2179647 |
|---|
| Gene Length | 906 bp |
|---|
| Protein Length | 301 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 643465332 |
|---|
| Product | inner-membrane translocator |
|---|
| Protein accession | YP_002362310 |
|---|
| Protein GI | 217978163 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
|---|
| TIGRFAM ID | [TIGR03409] urea ABC transporter, permease protein UrtB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 61 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGAACCT ACACGCTTTT CGTCGGCCAG ATTTTCAACG GCTTCAGCGT TGCCTCGCTT
TTCGTGCTGG CGGCCCTCGG CCTAGCGCTG AGCTTTGGTC TGATGCGCGT GATCAACATG
GCGCATGGCG AGATGTTGAT GCTCGGCGGC TATCTCGCCT ATTTGACGCT GCTGGTCGTT
CCCGGCCCGT TCGGCATTCT CGTGGCGATG CCTGTTGCTT TTATTGGGGC GGCGCTGGTC
GGCGCGGTGA TCGAATCGAC GGTGATCCGC CGCCTCTCGT CGCGCCCGCT CGACACGCTG
CTCGCGACCT GGGGCGTCAG CCTCATTCTG CAACAGGCGG CGCGCAATAT CTTCGGGGCG
ATTGGCGTCG GCGTCACCGC GCCTGAATGG CTGAACCATT CCTTCCGCGT CGAGAGCGGG
CTGCTCGCCG GGCTCAATCT TCCAGCGACG CGCATCTTCA TTCTCGCCGT CGCGATTGTC
GTGCTCGCGG GGCTCGGCCT CCTGATGGCG AAGACGCGGA TCGGCCTGCT CGTGCGCGCC
GTCAACCAGG ACCGCTTCAT GGCGGGGGCT TCGGGCATTA ATGTGCGCCA GGTCGATCTC
GCCGTGTTTT GTCTGGGCGC TGGCATCGCG GGCCTGGCCG GCGTCGTGCT TGCTCTGCTC
GGACCAGTGA CGCCGAATGT CGGCCAGACC TACATCATCC CGGCCTTCCT CGTCGTCATC
CTCGGCGGTC TCGGCAGCCT TGTCGGCACC ACCATCGCCT CGGTCATGGT CGGTCTGTTC
TCGGCGCTCG TCCAGATCTT CGTCGACGTT AGCATGTCGC AGGTGCTCCT CCTTCTGTTC
GTCATCGCCT TTATCCAGTT CCGACCGCAG GGCGTTATCG CCGTTCGCTC GCGGGCGCTG
GACTGA
|
|---|
| Protein sequence | MGTYTLFVGQ IFNGFSVASL FVLAALGLAL SFGLMRVINM AHGEMLMLGG YLAYLTLLVV
PGPFGILVAM PVAFIGAALV GAVIESTVIR RLSSRPLDTL LATWGVSLIL QQAARNIFGA
IGVGVTAPEW LNHSFRVESG LLAGLNLPAT RIFILAVAIV VLAGLGLLMA KTRIGLLVRA
VNQDRFMAGA SGINVRQVDL AVFCLGAGIA GLAGVVLALL GPVTPNVGQT YIIPAFLVVI
LGGLGSLVGT TIASVMVGLF SALVQIFVDV SMSQVLLLLF VIAFIQFRPQ GVIAVRSRAL
D
|
|---|
| |