Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msil_1005 |
Symbol | |
ID | 7091833 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylocella silvestris BL2 |
Kingdom | Bacteria |
Replicon accession | NC_011666 |
Strand | + |
Start bp | 1090172 |
End bp | 1091095 |
Gene Length | 924 bp |
Protein Length | 307 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 643464344 |
Product | putative transmembrane anti-sigma factor |
Protein accession | YP_002361336 |
Protein GI | 217977189 |
COG category | [K] Transcription |
COG ID | [COG5662] Predicted transmembrane transcriptional regulator (anti-sigma factor) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.00368006 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGCGGCG CTCCGCCCGC GATCAACGAC GAAGATTTGA TGGCCTTTGT CGACGGCGAG CTCAGCGCCG AGCAGCGCCG CGCTGTCGAG AGCTACATCG CATCTTCCCC CGCCGCCGCG GAGCGGGTGG AAATCTGGCG CCAGCAAGGA AAAGCGCTGC GCGCCGCCTT CGCGCGGGTC GAAGCCGAGC CGCCCGCTCC AGTCCTCGTG CCCTACCGAA AACGCACGCT TCCCCGCCTG ATTCGGTCCT GCGGCTCCTC GCCGTCGGGG ACGCCGGCCA GCGCGGCAAG GAGCGCTCTT GCCGATGACG GGAACGAACC GATCCGGCGC GATGAGTCCG CGCGCCGCGC CGCCCGCAGG AGAAAGCTCG CACTTGTCGC GGCCTTCGCC GCGGGCGCCG GCGCCGCTCT CGCCCTGGTT TATTTCAGCG ACCATCTCCC TGGCCGGCAG GCGGGTTCGA TCTGGCGCGG ACCGCCCGCG ACAGCGGCCG ACGACGCTAT GGCGCAACGC GCGCGCGACG CCCTGTCCGG CTTCAATGGC AAAACTGCGA GAAGCGGCTC CGCTTCCGCG GCCGCGGGCA GCGCCCTGAT TGTCCCCAAT CTGTCGGACG CCGGCTATGC GCTCATCGGC GCGCGCGCGG GGCAGGGCGC AAGCGGCGAT CCAGGCGAAG AGCCGTTCTG CCTGTTCTAC GCAAAAGGAA GCGCGCAGCC GGTGGCGCTC TGCATCGCCG GCAAGGACGA CGGCGCGGCA GGCGGCGCGG CGCAGATGAG CCTTTCGAGC GAAGCTGGAG CGGCCGGCGC GGTCGCGAGC TGGCGGCAGG CGGGAGGAGC CCGTTACGCT TTGGCTGGAT CGCTGCCGGA GGGCGCCCTG CGCGATCTCG CGGGCCGGGT CAGCAAGGAG GTTGCGGCGT TCGACGCGCG TTAG
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Protein sequence | MSGAPPAIND EDLMAFVDGE LSAEQRRAVE SYIASSPAAA ERVEIWRQQG KALRAAFARV EAEPPAPVLV PYRKRTLPRL IRSCGSSPSG TPASAARSAL ADDGNEPIRR DESARRAARR RKLALVAAFA AGAGAALALV YFSDHLPGRQ AGSIWRGPPA TAADDAMAQR ARDALSGFNG KTARSGSASA AAGSALIVPN LSDAGYALIG ARAGQGASGD PGEEPFCLFY AKGSAQPVAL CIAGKDDGAA GGAAQMSLSS EAGAAGAVAS WRQAGGARYA LAGSLPEGAL RDLAGRVSKE VAAFDAR
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