Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msil_0596 |
Symbol | |
ID | 7091659 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylocella silvestris BL2 |
Kingdom | Bacteria |
Replicon accession | NC_011666 |
Strand | + |
Start bp | 645621 |
End bp | 649181 |
Gene Length | 3561 bp |
Protein Length | 1186 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 643463928 |
Product | AsmA family protein |
Protein accession | YP_002360930 |
Protein GI | 217976783 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2982] Uncharacterized protein involved in outer membrane biogenesis |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.233427 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAGCCCC GCATGGGCTT TCTGACCCGG ATGGATGCGC TGAATTTGGA TGAGACGCGG CCCGTCTTTG CCTATATCGG ACAGGATCAA TCCGGCTTCC CGAACGACGA GACCGATTTG CGCGATAGCC TGACCGTCTT CGCCATAGGC GTGATCCTCG TTCTCACCGC GGCGCTCGTC GGCCCCTATC TCGTCGACTG GAGCGCGGAG CGCGGCTTGA TCCAATCGCG GCTCAGCGCG GCGATCGGGA GGCAGACGGA AATTGCTGGT CCAATCGACC TGAAGCTGCT GCCGACACCC TATTTTGTCG TTGGCGATAT ATCCGTCAAA GGCCCGGAGG GCCCCGCGTC CTGGCGCGCG TCCGCCAGCA AAATGCGGCT CGAAATCGCT TTTGCGCCCT TGCTGCGCGG CGAGGTGGAA TTTGTCGAGG CGGCAATCGA GAACCCCCGC CTTGAGGTTT CGCTTGGCCC AGACGGAGCG CCGGCGCTCA CGCTAAAAGA CAGCCCTTTG GCCCGAAACG TGCGGTTTCA GCGGATCAAG GCGACGGGCG GCTCGCTTCT CATCGACGAT CCGACGCGAA ACCGCCGCTT TGAGCTCGGC GGCCTTGATC TTGAAGCGGA AGCCGGATCG CTTTACGGCC CCTTCAAAGG CCATGGCTCG GCGCCTCTCC CAGACGGACG GTTTTCCTTT CAGTTTCTGA CCGGCGCGGC CGAAGCCGGC GAGATGAAGC TGAAGCTTTC GGCGGAGGCG CCGTCACGCG GCGCGCTGTC CTTCGAGGGC GGCCTTACAT TAACGCCCGA GGCGCAAAAG CTCGCCGGGG CGCTGCGGCT GCAAAGCGCC GACCCCGCCT TGCGGACGCT GAGCCAACTG ACGCTGACGC CGCAACGAGC GGCGTTTGAC GAGATCGAAG CGACGCTCGG CGAGGAGCCC AACTCGGCGA CGGCAAAGGG CGTAGGGGAG CTTGATTTTT CGGGGGCTCC TAAGGCGAGC CTGACGCTGT CTTCCGACCG GGTCGACGTG GACCTTCTCT CCAGCGGCCG GGCCGCAGCG GAGCTGGCCG CGCTTCCGCC GCCTCCTTTG CCGTTCGTCG TGAATTACAA AGCCAAGGCG CTGACCTGGG GCGGGGCCGG TTTCGCCGAC ATTGGCGCCA ATATCGTGTT TGGCAAGAAG GCCGAGGACC CCGGCGCGAC GCCGGGCGTC TGGCTGCGCC TCGAGGCGCG CGGACCGAAA AGCTCCCGGC TCTTCGTTGA TGGCGCGGCG CGCTTCGGCG GGGCGCCTGA ATTCGACGGT AAATTCAGCG CCGGCACGGA GGATGCAGGC TGGCTGAAGC CCTGGTTCGA GCGGGCCTTT GGCGCGCAAG CGGCGGCAGC GCCATGGCCA ATGGGCGGGG CTTTCGACGA CATTGCCTTT TCTGCAATCG ATCTCAGCGC TGCGACGCGC ATTACATCGC AGGCGATTGA ATTGCGCGAT CTCGACCTTG CGCTCGATGA TTCACATCTT TCAGGTCAAT TGTCTTATTG GCGCAAGCTC GCCACAAGGC CGGCGCGCAT CGAGGCCGAT CTTTCCACCC GCTCCCTCGA CCTTGCGGCT GTCGCCAACG CCTATGCAGG GGGCGCCGCG TCGCGCGCAG TGAGCGACCT CGACGGGTCG CTAAAATTCG AGGCCGCCGC CGTGCGTTTC GGCGCGTTCG CCCCGGCGGG CGCGCTCGGT CTTTCGATCA ACAAGACAGG CGATCGCATT GAGCTCGATC AATTGACTTT CGAGGGACCG GATGGGGCGA TGGCCGCCGC GAGCGGACTG CTGTCCAGCC AGAACGCCCG CCTCGACGCC GTGCTGAGCG CGCCGCGTGG TTTCGGGATA GCGGCGGCCT TGGCGAAAAT CGCTCCAGGG GCCCCGGCGA ACGCCCTGCT GTCGCGGGCG GACGCGCTGA CGCCGGTCGA TCTCAAACTC TTTGCCGAAG CCGCGCAGAG GCAGTCGGCT TTCGCCTTGA AAACACTCAC CGCGAAAGGA TCGATCGGCG GCGCGACGAT CGCCGCGACA ATCAATGGCG ATCCGGACAA GGGCGAGGAG CTGAGGCTAT CCGCTATCCT CGACGCCCGC GACAGCCTGC CGCTCATGCG CCTTGCCGGG CTTGCCGCCA CTGCGGCCGA CAATCCCGGC CGCGCCCATA TCGAGCTGAA GGCGCGCGGC TCGCCCCATG AGGCGACACA GGCCGCGGTG ATTTCGGCCG TCCTCGGCCA AGCCCGATTG AGCTTCGACG GGCGCGTCGG AGCCGATCTT TTTGACCCTT CCGCGATCGG AGCAATTTCC TTCACGGCGC CCGACGCCGC GCCTTTTTTG CGGGCGGCAG GCCTTGTTTT TCCGGATTTT GCCGCGAAGA CCCCGGCCGC CGTCTCGGGC GATCTGACGC TGACGGCGCG CGAGGTGAAA CTCGATAGCC TCAAGGCTAA TATCGCCGGG TCGTCCTTTG CCGGTTCGCT TGCCTATGAC GCCAAAGCGC AACCGCGACT CATCGGCGAC CTCGCGGCGG ACAGGCTGCC TGCGGCGGCG CTATTCGCCC TCGTGCTCGG ACCACCCGAA CCCGCCAAGG GCGGCGCTCT CTGGTCAAGC CTCGCTTTCG CGCCGCCGGC GTTTGATCTG CCGAGCGCAC GCATCGCGCT GACGGCGCGG GAAGCTCCGC TCGGCGCACC GCTCGCGCCC GGCGCCGGCC TTGGCAAAAA TCTCAAAGCG ACTTTGGTCA TGTCGCAGGG GCGTCTCGAC CTTGAAGACT TCACTCTCGA TCTCGCTGGC GGGCAGGCGT CCGGCGATCT CAAGCTGCGC CGATCAGGCT CCGAAGCCTC GCTCGCAACG CGGCTCGATC TGAAAAATGT AGCGCTCGAT CTGCCCTCAG CGCGCGGGCG TCTCGACGCC TCGATCGAGG CGGCCGGGAG CGGCAGAAGC GCGGACGGGC TCGCGGGCGC CGTCGCCGGC TCAGGCAAAA CCGCAATCGC CGATCTTGTC ATCCCCCGCA TCGATCCCGG CGCCCTGCCC CGGATTGTCG CCAAATTCGA TGAGGACGGC CATGAGCTCG GCGCAAAACA GATTGCGGCG GCCCTTGCGA GCGAATTGAA GCGCGGCGAT TTGCAGGCGG GCGACAGAGC TTTCGACATC GCGATCGCCT CCGGCGTGCT GACGCTGGCG TCAAAGCCGC CACAACCGGA TCAGTCGGGA TTTTCCGCCT CGTTCGACTT CCGCCGCGCG TTGCTAACGC AACGCCTGAC GCTCGTCGAT CCGGCGCCGC CGAAGGGATG GAGCGGCGCG CCGCCGCAGA TCGTGGCGAC GATTAAGGGG CTCGCTGGCG CGCCCTCGGT CGAAATCGAC GCGGCCGCGC TCGCCAACGC GCTGGCGAAC CGCGCGATCC AGCGCGAGAT CGCGCGCATC GAGGCCTATG AATTCGACAT TCATGAACGG GCGTTCTTCT ATCAGCGTCT GCTGTCCGAG CGCCGCCGGC AAGCCGAGCG CGACGAGGCG GCGGCCGAAG CAGCGGCGGC GCCGAAGCCC GCGGAATCGG CCGCGCCGTA A
|
Protein sequence | MEPRMGFLTR MDALNLDETR PVFAYIGQDQ SGFPNDETDL RDSLTVFAIG VILVLTAALV GPYLVDWSAE RGLIQSRLSA AIGRQTEIAG PIDLKLLPTP YFVVGDISVK GPEGPASWRA SASKMRLEIA FAPLLRGEVE FVEAAIENPR LEVSLGPDGA PALTLKDSPL ARNVRFQRIK ATGGSLLIDD PTRNRRFELG GLDLEAEAGS LYGPFKGHGS APLPDGRFSF QFLTGAAEAG EMKLKLSAEA PSRGALSFEG GLTLTPEAQK LAGALRLQSA DPALRTLSQL TLTPQRAAFD EIEATLGEEP NSATAKGVGE LDFSGAPKAS LTLSSDRVDV DLLSSGRAAA ELAALPPPPL PFVVNYKAKA LTWGGAGFAD IGANIVFGKK AEDPGATPGV WLRLEARGPK SSRLFVDGAA RFGGAPEFDG KFSAGTEDAG WLKPWFERAF GAQAAAAPWP MGGAFDDIAF SAIDLSAATR ITSQAIELRD LDLALDDSHL SGQLSYWRKL ATRPARIEAD LSTRSLDLAA VANAYAGGAA SRAVSDLDGS LKFEAAAVRF GAFAPAGALG LSINKTGDRI ELDQLTFEGP DGAMAAASGL LSSQNARLDA VLSAPRGFGI AAALAKIAPG APANALLSRA DALTPVDLKL FAEAAQRQSA FALKTLTAKG SIGGATIAAT INGDPDKGEE LRLSAILDAR DSLPLMRLAG LAATAADNPG RAHIELKARG SPHEATQAAV ISAVLGQARL SFDGRVGADL FDPSAIGAIS FTAPDAAPFL RAAGLVFPDF AAKTPAAVSG DLTLTAREVK LDSLKANIAG SSFAGSLAYD AKAQPRLIGD LAADRLPAAA LFALVLGPPE PAKGGALWSS LAFAPPAFDL PSARIALTAR EAPLGAPLAP GAGLGKNLKA TLVMSQGRLD LEDFTLDLAG GQASGDLKLR RSGSEASLAT RLDLKNVALD LPSARGRLDA SIEAAGSGRS ADGLAGAVAG SGKTAIADLV IPRIDPGALP RIVAKFDEDG HELGAKQIAA ALASELKRGD LQAGDRAFDI AIASGVLTLA SKPPQPDQSG FSASFDFRRA LLTQRLTLVD PAPPKGWSGA PPQIVATIKG LAGAPSVEID AAALANALAN RAIQREIARI EAYEFDIHER AFFYQRLLSE RRRQAERDEA AAEAAAAPKP AESAAP
|
| |