| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_0452 |
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| Symbol | |
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| ID | 7091183 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylocella silvestris BL2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011666 |
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| Strand | - |
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| Start bp | 494853 |
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| End bp | 497414 |
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| Gene Length | 2562 bp |
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| Protein Length | 853 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 643463782 |
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| Product | MscS Mechanosensitive ion channel |
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| Protein accession | YP_002360788 |
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| Protein GI | 217976641 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3264] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 0.372575 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAATGTC CTGGCTGCAT TTTGGCTGTC TCGATCGCGG CCCTGGCGCT GCTCGCGGTT
GCGCCCGCGC GCGGACAGAC AGCGCAGCCC GCCGCCCCCG CGGCGCAGCA GGCTCCCAAA
GCGCAGCAGC CCCAGGACGC GGCAAAGGAC AAGACCGCGC CGGCCGCGGC CCCTGCTCAG
CCGGCGGGGC CCCCCGCCCC GCCGCCGCCC GATCTCGCCC GCGCGCAGGA TGAGCTCGAA
AAAGCGAATG CCGCCTTGAA TGACGTCGAG GCCGGGCTCG AGCGTCACGA CTTAAGCGAC
GCCGATCTCG TCGCGAAGCG GCAGAGGCTG GCGCCGATCG GCGACGTCCT CAATGCGACG
GCCGAGAAGA TCGCGCCGCG GCTCGGCGAA ATCAAGGCGC GGCTGGATCA GCTTGGCCTT
CCGCCGGATG AGAAGTCGCC GCCGGAAAAT CAAAGCGTTA CGGAAGAACG CGCCGCTCAG
CAGCAAAGCT ATAACAATGC CGACGAGCTG TTGAAACGCG CCAAACTGCT GAGCGTCCGG
ACGGAGCAGT TGCGCACGAG CGTCGCCTCG CGCCGGCGCG CTTTGTTCAC GCGCTCCTTG
TTCCAGCGCT CATCGAGCAT CGCCGACGCC AGGCTGTGGC GCGACGTTCT GCCCGAAACG
CCGAAGAATG CGGAAGGCGT CGTCACCCTT TTCACCGACT GGGCCGGGCG GATCAACGAC
CGTTTCGACG GCTGGCGCCT GGCTGCGTTC TGGCTCTGCC TTCCCGCCGT GTTCCTCATC
TACATCCCGC TGGCGCGGCT GGCGCGGCGC GTGCTCGCGC GCCGCGATAC GGTGGAAAAA
CCAAGCCGCC TCCTGAAAAT ATTCGGCGCC TGGTGGATTG CGCTGGTGAT CGCCTTGCCG
CCGATCGCGC TGATCTATCT CGTCGTCTTT TCCCTCGATG CCGCCAATCT CACGAGTTTC
CGGATTCAGA CGGTGTTTAT GGCCATCGCC GGCGCCGTCG CGCGCGTCTG CGTCGCCGCC
GGTCTCGCAC GCGGTCTGTT CGCGCCGACG CGGCCGAACT GGCGCCTGCC GCCGATCAGC
GACGCCGCGG CCTCGCGCAT CGTCAGCGTC GCGGTCAGCG TCGCCGCCAT CGTCTCGATC
ACGCGCATCT GCGAGGCGCT GAACGAGGTC GTCGACGCAT CCTTTTCTTT TTCGGTGGCG
ACGCGCGGCT TGGGCGTGGC GATCGGCGCG GCTGCTCTGG GCATGGGCCT GTGGCGGACC
GGCGCCGACG TCTCCGACGA GGATTGCTTC GGTCCGCCGG TCACGCGGCG CTTGAACTGG
TTTAGCATTC TGCGCGGCGT CGCTCTTATT GGGGCCGTGG TCGCCGGCGG CGCGGTGCTT
GCCGGCTACC CCACCTTCGC CAGCTTTTTC CTCGATCAGC TGCTTTGGGT CAGCGCGATC
GCCGCGCTTT ATTTTCTCGC CAGCGTTTTG ATCGATGAAA GCATCACCGC GGGGTTCAAA
CCCGGCGCCC GGCTCGGCGA TTGGCTGACG ACACGGGTTG GCGTCAGGCG CAATTCGCTG
GAACTGCTCG GAGTCGTGCT CTCCGGCGTG TTGCGCGTGA GCCTCTTCAT CATTGGCCTC
ATCGCGATCC TTGCGCCCTG GGGTCTCCAG TCGACCGATG TTCCGCTCGA TCTGCGCGCG
GCCTTTTTCG GCTTCAAGGT CGCCGAGGTG ACGATATCGC CGGTCGCCAT CTTCGGCGCG
GCGGTGATTT TCGCTCTCGT CTCGGCCACC GTTCACGCCC TGCAGCGCTG GCTGGATTCC
AGCCTCCTGC CCAAGACAAA TCTCGATTCG GGGCTTCGCA ACTCGATCAT CACGAGCCTT
GGCTATCTCG GCTTTCTGCT ATCGGCCGGC GTTGCGTTGA GCTATCTCGG CCTCAGCTTC
GAGCGCCTCG CCATCGTCGC CGGCGCGCTA TCGGTCGGTA TCGGCTTCGG CTTGCAATCG
ATCGTCAATA ATTTCGTCTC CGGCCTGATT CTGCTTTGGG AGCGCGCAGT GCGGGTCGGC
GACTGGATCG TGGTCGGCGG CGATCAGGGT TTTGTCCGGC GCATCAATGT GCGTTCGACG
GAAATCGAAA CGGTCGATCG CTCCCAGGTG ATCATCCCGA ATTCGAGCCT GATTTCCGGC
GTCGTCAAGA ATTTGGTGCG CAACGACCGT TCCGGCCGCG TGTTGATCGA AGTCGCGGTG
AACGCTTCGG CCAATCCGGA GGAGGTGCGC GAAGTCCTGT TCGCGACGGC CAAAGCCAAT
GACCGCGTCC TGAAAATCCC CGCGCCACAA ATCTATTTTA CCGGAATGAG CGGCGCGACG
TTGAATTTCG AACTCGCCGC CTTTGTCGCC GACGTCGAGA CGATGGCCCG CGTCCGCAGC
GATCTGCATT TTGCGATTTT CAAAGAATTC CGGGCGCACA AATTCTTCGA CGGCCCCGAC
GCTGGACCGC AGAAGATCGA GATCGTCGGC GCTGCGGCGC AAAGCCTGTC GCCGCGCGCG
CCGGCTCAGA CCGACGCGGA CAACGCCCGC GCCGCCGGCT GA
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| Protein sequence | MKCPGCILAV SIAALALLAV APARGQTAQP AAPAAQQAPK AQQPQDAAKD KTAPAAAPAQ
PAGPPAPPPP DLARAQDELE KANAALNDVE AGLERHDLSD ADLVAKRQRL APIGDVLNAT
AEKIAPRLGE IKARLDQLGL PPDEKSPPEN QSVTEERAAQ QQSYNNADEL LKRAKLLSVR
TEQLRTSVAS RRRALFTRSL FQRSSSIADA RLWRDVLPET PKNAEGVVTL FTDWAGRIND
RFDGWRLAAF WLCLPAVFLI YIPLARLARR VLARRDTVEK PSRLLKIFGA WWIALVIALP
PIALIYLVVF SLDAANLTSF RIQTVFMAIA GAVARVCVAA GLARGLFAPT RPNWRLPPIS
DAAASRIVSV AVSVAAIVSI TRICEALNEV VDASFSFSVA TRGLGVAIGA AALGMGLWRT
GADVSDEDCF GPPVTRRLNW FSILRGVALI GAVVAGGAVL AGYPTFASFF LDQLLWVSAI
AALYFLASVL IDESITAGFK PGARLGDWLT TRVGVRRNSL ELLGVVLSGV LRVSLFIIGL
IAILAPWGLQ STDVPLDLRA AFFGFKVAEV TISPVAIFGA AVIFALVSAT VHALQRWLDS
SLLPKTNLDS GLRNSIITSL GYLGFLLSAG VALSYLGLSF ERLAIVAGAL SVGIGFGLQS
IVNNFVSGLI LLWERAVRVG DWIVVGGDQG FVRRINVRST EIETVDRSQV IIPNSSLISG
VVKNLVRNDR SGRVLIEVAV NASANPEEVR EVLFATAKAN DRVLKIPAPQ IYFTGMSGAT
LNFELAAFVA DVETMARVRS DLHFAIFKEF RAHKFFDGPD AGPQKIEIVG AAAQSLSPRA
PAQTDADNAR AAG
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