Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msil_0067 |
Symbol | |
ID | 7090382 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylocella silvestris BL2 |
Kingdom | Bacteria |
Replicon accession | NC_011666 |
Strand | - |
Start bp | 59454 |
End bp | 60584 |
Gene Length | 1131 bp |
Protein Length | 376 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 643463400 |
Product | Extracellular ligand-binding receptor |
Protein accession | YP_002360412 |
Protein GI | 217976265 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 0.188079 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCCTGT TCCGCCCAAT CCTCCGCTGC CTGCTCGCCG CCGCATTCCT CGCCTCGGCG ACTTTTGCGC GCGCCGCCGA TCCGCTCACG ATCGGCGCGA TCGAAATTTT GAGTGGACCG AACGCCAAAT ATGGCGTCGC CATCAAGCAG GGCTTCGACC TTGGCCTCGA TGAAATCAAC CGCGGCGGCG GCGTGCGCGG GGTTCCGCTG GCCATCGCTT ACGAGGATTC CGCCGGCAGC AAGGAGCAGG CGATCAACGC CGCGCGCCAG CTGATCGGCC GCGCCAAGGT TCCGCTGCTG CTCGGACCGA CGCTCTCGAC CGAAATGTTC GCGGTCGGTC CGATCGCCAA TCAGCGCCAG ACGCCGATCA TCGGCACATC GACGACCGCG ATTGGGGTCA CCGACATCGG TCCTTTCGTG TTCCGCACCT CTTTGCCCGA AGCCGATGTG ATCCCCGTGA CGCTGCGCGC CGCTCGCGAC AAGCTGGGCG TCAAGAAAGT CGCAGTGCTG TACGGCCGTG ACGACGCCTT CACCAAATCG GCCTATGACG TCATGAAGGC GGCGCTCGCC GAGCTGGGCT TTGAGGTTCT GACGACGGAG ACATTCGGCG CCAAGGACAC GGATTTTTCC GCGCAGTTGA CCAAGATCGC CAGCCTCAAT CCCGACGCGA TCGTCATCTC CGCGCTGGCC GACGCCGGGG CCGGCATTCT GCTCGCAAAG CAAGCGCTCG GCCTGCCGCA AACGGTGCGT GCGATCGGCG GCAATGGCAT GAATTCACCG AAGGTGCTCG AGATCGCTGG GCCCGCCGCG GATGGGCTTC TCGTCGGCAG CCCGTGGTTC GTCGGCAAGA GCGATCCACT CAATGCAAAG TTCATCGAAG CCTATCGCGC GAAATATGGC TCCGATCCCG ACCAATTTGC GGCGCAGGCC TATGACACGA TCAAGATCGC GGCGAGCGCG CTGAACGAGG CCAAGGATCT CAGCGGCGAA GCCATCCGCG ACGCGCTCCT CAAAACCAAG ATCGAGGGCG TCATGGGCCA ATTCGCCTTC ACGCCGGACC GGAGCCCGGC CGTCGTCTCG GGCGTCCTTG TCCTCGAAGC CGCCGGCGGC AAATTCACGA TTTTGAAATA G
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Protein sequence | MILFRPILRC LLAAAFLASA TFARAADPLT IGAIEILSGP NAKYGVAIKQ GFDLGLDEIN RGGGVRGVPL AIAYEDSAGS KEQAINAARQ LIGRAKVPLL LGPTLSTEMF AVGPIANQRQ TPIIGTSTTA IGVTDIGPFV FRTSLPEADV IPVTLRAARD KLGVKKVAVL YGRDDAFTKS AYDVMKAALA ELGFEVLTTE TFGAKDTDFS AQLTKIASLN PDAIVISALA DAGAGILLAK QALGLPQTVR AIGGNGMNSP KVLEIAGPAA DGLLVGSPWF VGKSDPLNAK FIEAYRAKYG SDPDQFAAQA YDTIKIAASA LNEAKDLSGE AIRDALLKTK IEGVMGQFAF TPDRSPAVVS GVLVLEAAGG KFTILK
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