Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msed_2293 |
Symbol | |
ID | 5104244 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Metallosphaera sedula DSM 5348 |
Kingdom | Archaea |
Replicon accession | NC_009440 |
Strand | + |
Start bp | 2188319 |
End bp | 2188873 |
Gene Length | 555 bp |
Protein Length | 184 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640508191 |
Product | XRE family transcriptional regulator |
Protein accession | YP_001192354 |
Protein GI | 146305038 |
COG category | [K] Transcription |
COG ID | [COG3620] Predicted transcriptional regulator with C-terminal CBS domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.351634 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTTCATTA ATTTATCCGA TATAAGAAAA ATGAGAGAGA TGGCGGGGCT AACACAGACG GAATTAGCCA GGAGGGTAGG TGTTTCTCAG TCTCTCATTG CGAAGATAGA GAAGGGAAAG ATTGATCCCA AACTATCGGT GGTTAGGAAG ATCTTGGACG AGCTCACTCC CCTCATTGAA GTCCCTGAAG TCGCAGTTAA CCTAATGCAT TCCCCTGTTA TTTCCGCTAA AATGGATGAT AGGGTCAAGG ACATTGTTGA GCTGATGGAG AGCAATAACA TATCCCAGGT ACCAGTTGTG AACTCTAGCG GGAAACTCAT GGGAATGATC TACGATTACG TTCTAATGAG GAAGCTTGCG CTTCCATCTT CTAGGAGCTT GAAGGCGGTC GACGTTATGG CGCCTTTACC ACCGCTCGTA AGTCCGTCCA CTCCCGTTAA TCAGGTCATG AAGCTTCTCA CCAGGTACTC AGTTACCCTG GTGGTAGAGG GTGACCTAAT TCCCTTGGGG ATTATCACCA GAAGCGATTT AATAACGTAT TTGGCAAGGA AATAG
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Protein sequence | MFINLSDIRK MREMAGLTQT ELARRVGVSQ SLIAKIEKGK IDPKLSVVRK ILDELTPLIE VPEVAVNLMH SPVISAKMDD RVKDIVELME SNNISQVPVV NSSGKLMGMI YDYVLMRKLA LPSSRSLKAV DVMAPLPPLV SPSTPVNQVM KLLTRYSVTL VVEGDLIPLG IITRSDLITY LARK
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