Gene Msed_2259 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_2259 
Symbol 
ID5104211 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp2162255 
End bp2163406 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content44% 
IMG OID640508156 
ProductD-fructose 1,6-bisphosphatase 
Protein accessionYP_001192321 
Protein GI146305005 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1980] Archaeal fructose 1,6-bisphosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.287275 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGATCTA CTGTTAGTGT AATCAAGGCA GATATTGGAA GTTTAGCTGG ACATCACGTG 
GTACATCCAG ATACAATGGC AGCTGCCAAC AGAGTTTTAG CAGAGGCTAA AAGACAGGGT
ATAATCCTTG ACTACTACAT TACCAATGTA GGTGATGATC TAGAACTAAT AATGAGTCAC
ACTAGGGGAG AATTGGATAC CAAAGTCCAT GAAACTGCCT GGGATGCATT CAAGGAAGCT
ACTAAGGTAT CCAAGGAATT GGGTCTATAT GCAGCGGGTC AGGATCTACT TTCGGACTCG
TTTTCTGGTA ACCTAAAGGG AATGGGTCCT GGGATTGCAG AACTAGATAT AGAGGAAAGA
CCTTCAGAAC CAATTGCCAT TTTCATGGCC GATAAAACTG AACCAGGAGC GTTCAACTTG
CCTCTTTATA AGATGTTTGC AGATCCATTC AACACAGCAG GCCTAGTTAT AGATCCCACA
ATGAATGAAG GATTCAAGTT CGAGGTATTG GACGTGTATG AGGGGCAAAG CGTGGTTTTG
AACAGTCCTG AAGAGATGTA CTCGCTATTG GGATTAATAG GGACCCCAGC AAGGTATGTG
ATAAGGAGAG TTTACAGGAA GGCTGATAAT ATGATCGGAT CAGTGACCTC CATAGAGAGA
TTGAATCTGA TAGCGGGGAA GTACGTGGGT AAGGATGATC CTGTCCTTAT AGTAAGATTA
CAGCACGGTT TTCCGGCTCT TGGAGAGGCA CTGGAGGCAT TTTCATTCCC ATACCTAGTC
CCTGGATGGA TGAGGGGAAG CCATTATGGC CCCATCATGC CAGTATCGCA AAGGGATGCC
AAGGCAACCA GATTTGATGG ACCTCCAAGG CTCATAGGGC TAGGCTTCAA TGTTAAGAAT
GGAAAGTTAA CCGGACCCTC CGATCTATTT GATGATCCCG CCTTCGACGA GACTAGAAGA
ATGGCATCCG TTATAACTGA CTATATGAGA AGACACGGAC CCTTTATGCC GCATAGACTA
GAGCCAACAG AAATGGAATA CACGACTTTG CCAACACTAA TAGAAAAACT AAAGCCTAGA
TTTAAGAAGG AAGAGGATGT GAAGAAGGCC AAACCTAGTG TTTATACATC AAAGGATCAA
GGAATGGACT AA
 
Protein sequence
MRSTVSVIKA DIGSLAGHHV VHPDTMAAAN RVLAEAKRQG IILDYYITNV GDDLELIMSH 
TRGELDTKVH ETAWDAFKEA TKVSKELGLY AAGQDLLSDS FSGNLKGMGP GIAELDIEER
PSEPIAIFMA DKTEPGAFNL PLYKMFADPF NTAGLVIDPT MNEGFKFEVL DVYEGQSVVL
NSPEEMYSLL GLIGTPARYV IRRVYRKADN MIGSVTSIER LNLIAGKYVG KDDPVLIVRL
QHGFPALGEA LEAFSFPYLV PGWMRGSHYG PIMPVSQRDA KATRFDGPPR LIGLGFNVKN
GKLTGPSDLF DDPAFDETRR MASVITDYMR RHGPFMPHRL EPTEMEYTTL PTLIEKLKPR
FKKEEDVKKA KPSVYTSKDQ GMD