| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_2213 |
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| Symbol | |
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| ID | 5105433 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 2123340 |
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| End bp | 2125055 |
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| Gene Length | 1716 bp |
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| Protein Length | 571 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640508106 |
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| Product | glycyl-tRNA synthetase |
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| Protein accession | YP_001192275 |
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| Protein GI | 146304959 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0423] Glycyl-tRNA synthetase (class II) |
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| TIGRFAM ID | [TIGR00389] glycyl-tRNA synthetase, dimeric type |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.472902 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.00000523773 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCAGAGT CTGACAAAGT GATCGAGTTA GCGAAGAGGA GAGGGATATT CTGGCCCTCC
TATGAGATAT ATGGTGGAGT AGCTGGGTTG TATGATATAG GACCTGTTGG TGCAAGAATT
AAGAACAAAA TAATTAATAC TTGGAGGAAA ATATTTGTTG AAGAGAACAG CGAATTTGTT
GTAGAAATTG AAACTCCCAT GATAACTCCA TCTAAAGTGC TTGAGGCCAG CGGACATGTG
GAGAACTTCA CTGACCCCAT AGTGGAGTGT ACTAAGTGTC ACAAAATATA CAGGGCCGAC
CATTTGGTGG AGGAAATGTT AAAGATCAAT GTGGAGAGAC TTAAACCATC TGAGCTGACT
TCCCTCATAT CTGAGAAGGG ACTTAAGTGT CCATCATGCG GAGGCGATTT AGGAGAAGTT
AGAAGTTTCA ATCTTCTCTT TGCGACCAAC ATAGGTCCCT ACTCTGGTAC GACCGGATAT
CTAAGGCCAG AGACAGCTCA GGGCATGTTT ACCTCCTTTA AGAGGGTTTA TGAGGCTACG
AGGCAGAGGT TACCCCTTGG GATAGCCCAA GTGGGAAGGG TAGCTAGGAA CGAGATCTCC
CCGAGGCAAG GTTTAGTTAG AATGAGGGAG TTTACCATCA TGGAGGTGGA ATTTTTCATT
GACCCCGATG ACAGGAATGT TCCCTGGTTA GATAGATACT ACAATGAGGA GTTTAGAGTT
CTATTTGGGG ATGCTAAGGT AAAGGGTCTG AAACCGGCTA CGATGAAGGT AAAGGAAATG
ATTGAGGAGG GTCTGCTCGT AAATCCGTGG ATGGGCTTTT GGATGGCATC AGCGTCCAGG
TTTGTCCAGG CACTGGGTAT ATCTAAGGAT AGTTTCTATT TCGAAGAGAA ATTACCTGAG
GAAAGGGCTC ACTACTCATC GCAAACCTTT GATCAGATAG TCGAGATCAT GGGGGAGAAG
GTGGAAATAT CGGGGCATGC GTACAGGGGA AACTATGACC TGAGCAGGCA CTCAAAGTTC
AGTAACGAAG ATCTAACTGT TTTCAAGAAG TTCGATCAAC CTAGGACAGT GGTAAAGAAG
ACCGTCATAG TGAACAGGGA TAGGTTCAAG GATAATCCAG AACTTCAGAA GGAAGTCATG
ATGCTGGTGT CTGGAAAATC GCCAGAGCAA GTTGAGGAGT TGCTAAATAA ACAGGTCCAG
GTTGCTGGAA GACCGCTGTC TGAGTTTGTC CGGATTATGA ACAGGGAAGA GAAGGAACAC
GGAATTAAGT TCTACCCACA TGTGGTTGAA CCGTCATTTG GGGTAGAAAG ATGTCTCTAC
CTAAGCGTGC TTTCAGCTTA CAGAGAGAAG AAGGATCGAG TGGTATTGGC CTTACCTAAG
GATTTAGCTC CCTATCAAGT CGCAGTATTT CCGCTTTTAG AGAGGGATGA ACTCATAAAG
AAGGCTAGGG AGATATATAA TCTCCTTTCC GGGAAGTATG AGGTCCTATT TGATGACGCA
GGAAGCATAG GAAAGAGATA TGCAAGAGTG GATGAGATTG GTGTACCATA CGCAGTCACG
GTTGACCCAC AGACATTGTC TGATGATTCT GTGACCATTA GGGACAGGGA CTCTTGGAGC
CAAATTAGAA TCAAAACATC CGATCTGGAA TCTGTTATGG ACAAGTTATT TAGTGGGCAA
GATTTTAGTA TGTTAACAGG AGAGGCGAAA AGATGA
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| Protein sequence | MPESDKVIEL AKRRGIFWPS YEIYGGVAGL YDIGPVGARI KNKIINTWRK IFVEENSEFV
VEIETPMITP SKVLEASGHV ENFTDPIVEC TKCHKIYRAD HLVEEMLKIN VERLKPSELT
SLISEKGLKC PSCGGDLGEV RSFNLLFATN IGPYSGTTGY LRPETAQGMF TSFKRVYEAT
RQRLPLGIAQ VGRVARNEIS PRQGLVRMRE FTIMEVEFFI DPDDRNVPWL DRYYNEEFRV
LFGDAKVKGL KPATMKVKEM IEEGLLVNPW MGFWMASASR FVQALGISKD SFYFEEKLPE
ERAHYSSQTF DQIVEIMGEK VEISGHAYRG NYDLSRHSKF SNEDLTVFKK FDQPRTVVKK
TVIVNRDRFK DNPELQKEVM MLVSGKSPEQ VEELLNKQVQ VAGRPLSEFV RIMNREEKEH
GIKFYPHVVE PSFGVERCLY LSVLSAYREK KDRVVLALPK DLAPYQVAVF PLLERDELIK
KAREIYNLLS GKYEVLFDDA GSIGKRYARV DEIGVPYAVT VDPQTLSDDS VTIRDRDSWS
QIRIKTSDLE SVMDKLFSGQ DFSMLTGEAK R
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