| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_2142 |
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| Symbol | rps9p |
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| ID | 5104881 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 2060589 |
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| End bp | 2061002 |
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| Gene Length | 414 bp |
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| Protein Length | 137 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640508033 |
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| Product | 30S ribosomal protein S9P |
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| Protein accession | YP_001192205 |
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| Protein GI | 146304889 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0103] Ribosomal protein S9 |
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| TIGRFAM ID | [TIGR03627] archaeal ribosomal protein S9P |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000000924754 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.000062227 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGTCAACTG AGTCGCGCGT GATAATTACA AATTCCAGAA GGAAGATGGC TAGGGCAAAA
TGCTATCTCT TCCCCGGGAA GGGAAGGATA TTCGTGAATG ACGTTCCCAT AGAACTAATC
CCAGTGGAAG TAATCAGAAT GAAAATAATG GAACCTATGT TGCTAGCCGG TGAAGGAATT
ACTTCCAAGG TGGATGTGAA GATCTATACC TATGGAGGAG GAATAATGGG TCAGGCTGAT
GCAGCGAGAA TGGCTTTAGC CAGGGCCCTA GTTAGATTTA CAGGGAGCCA GGAGCTCAAG
GAGCTTTACA AGAAGTATGA CAGAACCATG ATGGCCGGAG ATCCTAGGCA AACTGAGGCC
GAGAAATGGA TGAGATATAG CGCGAGAAGA TGGAGGCAGA AATCCTACAG GTGA
|
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| Protein sequence | MSTESRVIIT NSRRKMARAK CYLFPGKGRI FVNDVPIELI PVEVIRMKIM EPMLLAGEGI
TSKVDVKIYT YGGGIMGQAD AARMALARAL VRFTGSQELK ELYKKYDRTM MAGDPRQTEA
EKWMRYSARR WRQKSYR
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