| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_2111 |
|---|
| Symbol | |
|---|
| ID | 5104404 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Metallosphaera sedula DSM 5348 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009440 |
|---|
| Strand | + |
|---|
| Start bp | 2031301 |
|---|
| End bp | 2031882 |
|---|
| Gene Length | 582 bp |
|---|
| Protein Length | 193 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 640508000 |
|---|
| Product | nuclease |
|---|
| Protein accession | YP_001192174 |
|---|
| Protein GI | 146304858 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1475] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGCTG CGAGTATTAC GCTAGACTAC GTGGATCCCA GGGACCTGAA ACCTCATGAG
GATATCCTGA AGAACAGACT CGCTGAAACC ATTATTTCGA TAAGGGAGAC CAAATCCGTA
GTCCCCATAA TCGTTGACCA TAGGACTCTG TTAATAATTG ACGGTCATCA TAGATGGGAG
GCTCTCTCAG CCCTTGGATA CAAAAGAATA CCAATATACT ACGTGGATTA TCTAGACCCT
AGGATTAGTG TTGGGATTTG GTATAGAAAA TTAACCCTGA ACAGCGTAAG CAAATTGTAT
CTAAAATCGA TGGAATCTGA GGGGGACGTA TGTATTCAGA TCGAGTCCAA AATCTGCTCT
AGATCCCACT TTGAGGCGTA CTGGAAACTT GAGCTCATAG AACAGAGTTT AAGGAGATTT
GGGGTACAAG TGGAGAGAAA TCCTAGCGAA GGATATAAAC CACCTAATCT GTCCAAGGAG
ATAATACTGA AAATAGCAAG CAAGGAGACC AGACTACCTC CCAAGAGCAG TAGACATCTA
TATGATTTTA TTATCCCCAA GGATAGAGTA AAACTACAAT GA
|
|---|
| Protein sequence | MTAASITLDY VDPRDLKPHE DILKNRLAET IISIRETKSV VPIIVDHRTL LIIDGHHRWE
ALSALGYKRI PIYYVDYLDP RISVGIWYRK LTLNSVSKLY LKSMESEGDV CIQIESKICS
RSHFEAYWKL ELIEQSLRRF GVQVERNPSE GYKPPNLSKE IILKIASKET RLPPKSSRHL
YDFIIPKDRV KLQ
|
|---|
| |