Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msed_2102 |
Symbol | |
ID | 5104396 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Metallosphaera sedula DSM 5348 |
Kingdom | Archaea |
Replicon accession | NC_009440 |
Strand | + |
Start bp | 2023330 |
End bp | 2023974 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640507992 |
Product | precorrin-6Y C5,15-methyltransferase (decarboxylating) |
Protein accession | YP_001192166 |
Protein GI | 146304850 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2241] Precorrin-6B methylase 1 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGATTATC AACCGGGTCA GAGAAATTCT TGGCCTAAGA TCATAGGGGC TGGGCCGGGA AGCCCCGACT ACTTTACCTT GAAGCTAGTT AATAACTTGC GCGATGCTAG GAAAATAATT GCTACGAGGA GAGTTCTGAG TGCAGTAAGA CCTTTCACTC ACGCTGAACT CATTGAACTT GAGGAGGGTT CCAAGTTCTA CTCTATGATT AAAAACGTCG AAGCAGAGAA AGGAACCTTG ATCCTGTCAA CGGGAGATCC AATGATAGCT GGAATAGGAA AATTCTTTCC ACATAATGAA ATAGAGCCAG GAATCAGTTC TATCCAGAAG TGTGCCTCAC TAATACACAG GGAGATAACT AATAGTGCCA TTATCTCTAT AAGATATGGA TATAATTATG AGAAAGTGGA TGCAGTATTA CGTCTTGGGT TGAGCGTTTT CCTCCTCCCA GAACCGGGGC TAACGGTAGG GGATAGTCTG AGAAAATTAT TGTTGTATAT TACGAGGCCT GAAAAGATGG AAGTCTCCGT CTGTCTTAAT CTATCACTAG AGAACGAAAG AGTAATAAAT GGAAAAATGT TGGAGCTCAC TGACCTAAAC GATAATGGGC TCAAGGTAAT TTTCATCTCA CCCTCCGTGA ATTAA
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Protein sequence | MDYQPGQRNS WPKIIGAGPG SPDYFTLKLV NNLRDARKII ATRRVLSAVR PFTHAELIEL EEGSKFYSMI KNVEAEKGTL ILSTGDPMIA GIGKFFPHNE IEPGISSIQK CASLIHREIT NSAIISIRYG YNYEKVDAVL RLGLSVFLLP EPGLTVGDSL RKLLLYITRP EKMEVSVCLN LSLENERVIN GKMLELTDLN DNGLKVIFIS PSVN
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