| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_2052 |
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| Symbol | |
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| ID | 5105032 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 1973930 |
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| End bp | 1974583 |
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| Gene Length | 654 bp |
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| Protein Length | 217 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640507942 |
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| Product | proteasome endopeptidase complex |
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| Protein accession | YP_001192116 |
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| Protein GI | 146304800 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0638] 20S proteasome, alpha and beta subunits |
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| TIGRFAM ID | [TIGR03634] proteasome endopeptidase complex, archaeal, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAGGTT TTGGAGAATT TGAGAGCAGA CCCTCAAAGG ATAAGATCAA GATCCTCAAG
GGCACTACCA CTGTGGGTTT AGTGGTTAAG GATGCCGTTA TCCTGGCTGC CGACAGGAGA
GCCAGTGCAG GGTTTTTTGT TGCCAACAAG ATGGTCAGAA AAATAGTGTA CATTGATGAC
CGCATTGGGA TGACTACCGC GGGTAGTGTT GCAGATCTAC AATTTATCTA TAATTACATG
AAGAATATAT ACCACTATAA CCTTATTTCA GGGAATAGAC CAGTGACCGT CAAGTCCCTA
GCTACTTATC TCACAAACAT CCTATCCCAG AACAAGTACT TCCCATATCT GGTCCAGATA
CTCATGGGAG GCTATGATAC CCAACCCAGG CTATTCAATC TCGACTACCT AGGGGACATG
ACAGAGGAGA CATATGTTGC AACGGGTTCA GGTTCTCCAG TGGCCATGGG CGTATTAGAG
GATGGCTATA GTCCTGATCT CACGGGCGAC CAGGCTATGG ATCTGGCAGC AAGGGCTGTT
ATGTCAGCAA TTAAGAGGGA TTCCTTCACA GGGACAGGGG TAATTGTGAC GAAGATAACG
AAAGAGGGCC ACGTGGAAAG GGAGATTTAT CCTAACAGGA AGGAAGCAAT GTAA
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| Protein sequence | MEGFGEFESR PSKDKIKILK GTTTVGLVVK DAVILAADRR ASAGFFVANK MVRKIVYIDD
RIGMTTAGSV ADLQFIYNYM KNIYHYNLIS GNRPVTVKSL ATYLTNILSQ NKYFPYLVQI
LMGGYDTQPR LFNLDYLGDM TEETYVATGS GSPVAMGVLE DGYSPDLTGD QAMDLAARAV
MSAIKRDSFT GTGVIVTKIT KEGHVEREIY PNRKEAM
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