| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_2002 |
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| Symbol | ubiA |
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| ID | 5103389 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 1935448 |
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| End bp | 1936338 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640507890 |
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| Product | protoheme IX farnesyltransferase |
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| Protein accession | YP_001192066 |
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| Protein GI | 146304750 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0109] Polyprenyltransferase (cytochrome oxidase assembly factor) |
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| TIGRFAM ID | [TIGR01473] protoheme IX farnesyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGAATA CTACAATAAA AAACGGGATT AATTTGGCTA CTTCCATTTC AGCTAGGCTG
ATATATTACG CAAAGCTGAG TAAACCCAGA ATAATCTGGT TACTGGACTT AGCTGCCCTG
TCTGGCGCCT TTCTCTCAGG TAAGCTGATG CCCTTGAGCA TTCTAGCTGT TTTAGTGGGA
GGAACTTTTG CCTCGGCTGG CTCCATGATA ATTAACGAGG GAATAGAGAT AGATAAAGAC
AAGGTAATGA AGAGGACCTC AAAGAGACCA ACGGTGATGG GTTACGTTTC ACAGAAGGAG
GCAATCTACG TGGGAATCGC GCTCCTAACC CTTGGCACGC TAGTGGGTCT GCTGGATAAT
CCCCTCACTT CGTTCTTCAT TCTCCTGGGG GGCTTAGTTT ACGTTCTAGT TTATACAGTG
TGGTTGAAAC CTAGGAGCCC ATTGAACATA GTGATAGGTG GCCTAGCGGG AAGCGCTGCT
GCTTGGGCAG GCTACGCATC TACTACGTCC TCCTTTACTA TCCCCTCTAT TCTGCTCGGA
CTTCTAATTT TCATGTGGAC TCCGGGCCAC TTTTGGGCCT TGGCCCTGAA GTTTAAGGAG
GACTATTCTA GGGCTGGAAT TCCCATGTTG CCCGTGATAA TGCCTGAGAA CTTTTCCGCT
AAGATGATAG CTCTATCCAA CGCATTGATG ATACCCTTCG CCTTGGCCCT TTACCTTTAT
GCAGGAGTAA TTTACGGGAT AGTGGCAGGA ATTCTCTCCG CTGTGCAGAT GTACTTCAGT
GTTAGGTTGA TGAGAAATCC AACTGGAGAA GAGGCGTGGA GATCGTTTAA GTTCTCTTCC
CCATATCTAG CTATTCTATT GATTCTTATT ATTCTAACCA GATTAATCTA A
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| Protein sequence | MTNTTIKNGI NLATSISARL IYYAKLSKPR IIWLLDLAAL SGAFLSGKLM PLSILAVLVG
GTFASAGSMI INEGIEIDKD KVMKRTSKRP TVMGYVSQKE AIYVGIALLT LGTLVGLLDN
PLTSFFILLG GLVYVLVYTV WLKPRSPLNI VIGGLAGSAA AWAGYASTTS SFTIPSILLG
LLIFMWTPGH FWALALKFKE DYSRAGIPML PVIMPENFSA KMIALSNALM IPFALALYLY
AGVIYGIVAG ILSAVQMYFS VRLMRNPTGE EAWRSFKFSS PYLAILLILI ILTRLI
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