| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1952 |
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| Symbol | |
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| ID | 5103339 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 1893821 |
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| End bp | 1895188 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640507840 |
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| Product | seryl-tRNA synthetase |
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| Protein accession | YP_001192016 |
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| Protein GI | 146304700 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0172] Seryl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00414] seryl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCCTGGA GTTTACTTGA GCTAATACGG AACAACCCAG ATTCGTTAAT GGAAAGCTTG
AGAAAGAGGA ATGTTAACCC TCAACTGGCA GAAAAGGCTG TGGAGCTTGA CAAGAAATGG
AGGGCCATAC TCCAAGAGGT CGAGAAGCTT AGGCATGAAC ATAACGTGGT CAGTTCACAG
ATTCCGAGAC TCTCGCCAGA GGAGAGGAAA AAGAAAATTG AGGAGGCGAG AAACCTACTC
TCGATAATAG AGGCCAAGGA AAAGGAACTG AAGACGATAG AGGAGGAGAG AGATAACATC
CTGAGGACTT TACCCAACGT GGTTCATGAG AGTGTGCCTG TCGGTCCAGA TGATTCGTAT
AACGTTCCTA TAAAGGTATG GGGTAAGTTC AGGGTATACG AAAAGGACGT CAACGAGTTC
CTATCACAGG TTAAGGGTCT TAACCCGGAT TACGAGATAA TCAAGTTTAA GCCTGTGGGT
CACGCTGATG AACTTGAGGC AGTACTCAAA CTGGGTAATA CAGCAAAGGC AGGGGAAGTT
GCTGGATCCA GGTTCTACTA TCTTTTTGAG GACGTTGCGT GGTTAGAACA GGCATTGATA
GCTTACGCCT TGGACGTGAT AACCTCGAAG GGTTATTCCC TGGTAATTCC TCCATACATG
CTAAGGGGAG AGGTAATACA GTCAGTGATT GACCTAGACA CTTTCAAGGA CGCAATTTAC
AAGATCGAGG GAGAAGACCT TTACCTAATA GCCACCGCGG AACATCCCAT AGCTGCGCTG
TATTTTAAGG AGGAAATAGA GGCAGAGAGG CTCCCCCTCA GATATGTCGG CTTAAGTCCC
GCTTTCAGGA AAGAGGCTGG GGCTGCTAAC AAGGACCTTA AGGGGATATT CAGGGTTCAT
CAGTTCAATA AGGTGGAACA ATTCATTTTC TCCTTACCTG AGGACAGTTG GAAATTCCAT
GAGGAACTGC TAGGCAACGC TGAACAGATA TTTCAAGGTC TTGAGCTACC ATATAGGGTG
GTGAATATTG CCTCCGGTGA TCTAGGAGCA TGTGCAGCAA AGAAATATGA TTTGGAGGTG
TGGATGCCAG CACAGGCCAA GTTTAGGGAA ATGGTGAGCT GCAGTAACTG TACGGATTGG
CAGGCATTTA GAATGAAAAT AAGGTTTGTG GACAGGAAGA AGAATAGAAA GGGATTCGTG
CATACCCTGA ATAGCACTGC AGTTGCTACA ACTAGGGCAA TAACTGCAAT CCTTGAGAAC
AACCAGCTCG AAGATGGTTC AGTGGTTATT CCCAAGGTTT TAAGGCCTTA TCTTGAGAGG
TTCCAGAGAG CTCCTAAAGA CTACATAACA CCTAGAAAAA AGAGTTAG
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| Protein sequence | MSWSLLELIR NNPDSLMESL RKRNVNPQLA EKAVELDKKW RAILQEVEKL RHEHNVVSSQ
IPRLSPEERK KKIEEARNLL SIIEAKEKEL KTIEEERDNI LRTLPNVVHE SVPVGPDDSY
NVPIKVWGKF RVYEKDVNEF LSQVKGLNPD YEIIKFKPVG HADELEAVLK LGNTAKAGEV
AGSRFYYLFE DVAWLEQALI AYALDVITSK GYSLVIPPYM LRGEVIQSVI DLDTFKDAIY
KIEGEDLYLI ATAEHPIAAL YFKEEIEAER LPLRYVGLSP AFRKEAGAAN KDLKGIFRVH
QFNKVEQFIF SLPEDSWKFH EELLGNAEQI FQGLELPYRV VNIASGDLGA CAAKKYDLEV
WMPAQAKFRE MVSCSNCTDW QAFRMKIRFV DRKKNRKGFV HTLNSTAVAT TRAITAILEN
NQLEDGSVVI PKVLRPYLER FQRAPKDYIT PRKKS
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